lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000770; tableName=wgEncodeSydhTfbsGm10847InputTnfaIggrabSig; md5sum=a531f91623ce674f363248ccbc068e8f;
GM10847
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000734
5.8 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000770; labVersion=remapped from hg18, Data paired with GM10847_IgG_Control; md5sum=6cfab3b98e353bfc2f129d4af9723951;
GM10847
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000734
837 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000770; labVersion=remapped from hg18, Data paired with GM10847_IgG_Control; md5sum=be15f656108b2db06a03426986faa48e;
GM10847
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000734
5.7 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1392; controlId=wgEncodeEH000770; labVersion=remapped from hg18, Data paired with GM10847_IgG_Control; md5sum=da6c6640c14626bd7b941f4883c5df39;
GM10847
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000734
709 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1392; controlId=wgEncodeEH000770; labVersion=remapped from hg18, Data paired with GM10847_IgG_Control; md5sum=8c01a9b04c58c3a2ede21004d74370c4;
GM10847
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000734
5.5 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1388; controlId=wgEncodeEH000770; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM10847_IgG_Control; md5sum=c39d6ff2c92bbb542b3083086512a303;
GM10847
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000734
163 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1388; controlId=wgEncodeEH000770; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM10847_IgG_Control; md5sum=d810f6681cb059b4e62763e4b1a849d9;
GM10847
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000734
5.7 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1377; controlId=wgEncodeEH000770; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM10847_IgG_Control; md5sum=6609c912c745bbec309ab35b2c2d4cd7;
GM10847
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000734
396 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1377; controlId=wgEncodeEH000770; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM10847_IgG_Control; md5sum=3a6b2f11531b7dbff6fdc1e3e38b897b;
GM10847
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000734
5.7 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1366; controlId=wgEncodeEH000770; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM10847_IgG_Control; md5sum=cc501af8f2418443df94c22288527389;
GM10847
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000734
442 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1366; controlId=wgEncodeEH000770; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM10847_IgG_Control; md5sum=20ee2e3fd630f4422b3a271c7a0326bd;
GM10847
NFKB (sc-372)
TNF-alpha
Peaks
IgG-rab
exp
wgEncodeEH000734
GSM935527
157 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000770; tableName=wgEncodeSydhTfbsGm10847NfkbTnfaIggrabPk; md5sum=87cfeab4b6b3d746ce5bd994d5b17b40;
GM10847
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000734
GSM935527
126 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1050; controlId=wgEncodeEH000770; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM10847_IgG_Control; md5sum=76112d638f2c2dc3fca65df88d4e470b;
GM10847
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000734
GSM935527
311 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1050; controlId=wgEncodeEH000770; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM10847_IgG_Control; md5sum=44c1ccef8d6ce04be3e13dd39df366dd;
GM10847
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000734
GSM935527
347 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1050; controlId=wgEncodeEH000770; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM10847_IgG_Control; md5sum=05ba627a6715263f3385f87686382221;
GM10847
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000734
GSM935527
547 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1050; controlId=wgEncodeEH000770; labVersion=Data paired with GM10847_IgG_Control; md5sum=b4d22334fb98a1fefa91d14d3076117c;
GM10847
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000734
GSM935527
683 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1050; controlId=wgEncodeEH000770; labVersion=Data paired with GM10847_IgG_Control; md5sum=aba590af3ad1a509f26a141241c42bd6;
GM10847
NFKB (sc-372)
TNF-alpha
Signal
IgG-rab
exp
wgEncodeEH000734
GSM935527
488 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000770; tableName=wgEncodeSydhTfbsGm10847NfkbTnfaIggrabSig; md5sum=7810cbedcca7cd90365e966b3314a449;
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1366; controlId=wgEncodeEH000728; labVersion=remapped from hg18, Data paired with GM10847_IgG_Control.; md5sum=5f95d9b068e75890809e37bd00f2c440;
GM10847
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000705
212 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1366; controlId=wgEncodeEH000728; labVersion=remapped from hg18, Data paired with GM10847_IgG_Control.; md5sum=214de7cd00dde5a46f0b9fed00157c5c;
GM10847
POL2 (MMS-126R)
None
Peaks
IgG-mus
exp
wgEncodeEH000705
GSM935389
181 KB
narrowPeak
2011-06-09
2012-03-09
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4313; controlId=wgEncodeEH000728; tableName=wgEncodeSydhTfbsGm10847Pol2IggmusPk; md5sum=ddf0d376e5c674eaa88ffb8e3698a03b;
GM10847
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000705
GSM935389
100 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=862; controlId=wgEncodeEH000728; labVersion=Data paired with GM10847_IgG_Control.; md5sum=e0660d3be0f2d68ca3dc417a718aa332;
GM10847
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000705
GSM935389
173 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=862; controlId=wgEncodeEH000728; labVersion=Data paired with GM10847_IgG_Control.; md5sum=ce18d4f035fd315fcec4c2a5feec7618;
GM10847
POL2 (MMS-126R)
None
Signal
IgG-mus
exp
wgEncodeEH000705
GSM935389
139 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000728; tableName=wgEncodeSydhTfbsGm10847Pol2IggmusSig; md5sum=d7ff578729be12fdc2a005b2d1fce064;
GM12878
BHLHE40 (NB100-1800)
None
Alignments
IgG-mus
exp
wgEncodeEH002025
5.8 MB
bam.bai
2011-06-29
2012-03-29
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4453; controlId=wgEncodeEH000706; md5sum=4156d8f6a198fc26f30129b0e6da79ee;
GM12878
BHLHE40 (NB100-1800)
None
Alignments
IgG-mus
exp
wgEncodeEH002025
471 MB
bam
2011-06-29
2012-03-29
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4453; controlId=wgEncodeEH000706; md5sum=27d091541df2d037c36e043cbe7101c0;
GM12878
BHLHE40 (NB100-1800)
None
Alignments
IgG-mus
exp
wgEncodeEH002025
5.7 MB
bam.bai
2011-06-29
2012-03-29
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4453; controlId=wgEncodeEH000706; md5sum=6cc1ac9773ae5033c173560f12aebda7;
GM12878
BHLHE40 (NB100-1800)
None
Alignments
IgG-mus
exp
wgEncodeEH002025
365 MB
bam
2011-06-29
2012-03-29
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4453; controlId=wgEncodeEH000706; md5sum=a79378a70a030cc6cba7440bc080a4a1;
lab=USC; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5253; controlId=wgEncodeEH000625; md5sum=355cebb2213f004d09a13d32f06e0e1c;
GM12878
IKZF1 (IKZF1 (IkN))
None
Alignments
Standard Control
exp
wgEncodeEH002811
661 MB
bam
2011-12-18
2012-09-18
lab=USC; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5253; controlId=wgEncodeEH000625; md5sum=c7f43718ec0e2d44cc8067f35ba9baeb;
GM12878
IKZF1 (IKZF1 (IkN))
None
Alignments
Standard Control
exp
wgEncodeEH002811
5.8 MB
bam.bai
2011-12-18
2012-09-18
lab=USC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5253; controlId=wgEncodeEH000625; md5sum=b8886bc0b75ff63a36812a57a56e3312;
GM12878
IKZF1 (IKZF1 (IkN))
None
Alignments
Standard Control
exp
wgEncodeEH002811
419 MB
bam
2011-12-18
2012-09-18
lab=USC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5253; controlId=wgEncodeEH000625; md5sum=471cf6b88573c9becd318020fa9cd052;
GM12878
IKZF1 (IKZF1 (IkN))
None
Peaks
Standard Control
exp
wgEncodeEH002811
GSM935442
500 KB
narrowPeak
2011-12-18
2012-09-18
lab=USC; dataVersion=ENCODE Mar 2012 Freeze; subId=5253; controlId=wgEncodeEH000625; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsGm12878Ikzf1iknuclaStdPk; md5sum=c9cad861697c5dbe74451345e2ca78af;
GM12878
IKZF1 (IKZF1 (IkN))
None
Raw data
Standard Control
exp
wgEncodeEH002811
GSM935442
1.3 GB
fastq.tgz
2011-12-18
2012-09-18
lab=USC; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5253; controlId=wgEncodeEH000625; md5sum=4934066e31cfec139a358f57f23dcc71;
GM12878
IKZF1 (IKZF1 (IkN))
None
Raw data
Standard Control
exp
wgEncodeEH002811
GSM935442
1.4 GB
fastq.tgz
2011-12-18
2012-09-18
lab=USC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5253; controlId=wgEncodeEH000625; md5sum=09a04552cc538fedd0bc9e21c1398fc5;
GM12878
IKZF1 (IKZF1 (IkN))
None
Signal
Standard Control
exp
wgEncodeEH002811
GSM935442
389 MB
bigWig
2011-12-18
2012-09-18
lab=USC; dataVersion=ENCODE Mar 2012 Freeze; subId=5253; controlId=wgEncodeEH000625; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsGm12878Ikzf1iknuclaStdSig; md5sum=6d7e34e51d59f22fa463188b21197452;
GM12878
IRF3 (sc-9082)
None
Alignments
IgG-mus
exp
wgEncodeEH001809
5.8 MB
bam.bai
2010-10-20
2011-07-20
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2524; controlId=wgEncodeEH000706; md5sum=8a2021c7b9d0dee1375238928f29ecee;
GM12878
IRF3 (sc-9082)
None
Alignments
IgG-mus
exp
wgEncodeEH001809
479 MB
bam
2010-10-20
2011-07-20
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2524; controlId=wgEncodeEH000706; md5sum=15c9ab1bf9ca3976d93d10349ac5b26f;
GM12878
IRF3 (sc-9082)
None
Alignments
IgG-mus
exp
wgEncodeEH001809
5.7 MB
bam.bai
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2524; controlId=wgEncodeEH000706; md5sum=a2f1dffbf7af69f4e887936392fdbec7;
GM12878
IRF3 (sc-9082)
None
Alignments
IgG-mus
exp
wgEncodeEH001809
348 MB
bam
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2524; controlId=wgEncodeEH000706; md5sum=97dfc3f42cecedd86a0062b08430b971;
GM12878
IRF3 (sc-9082)
None
Peaks
IgG-mus
exp
wgEncodeEH001809
GSM935651
283 KB
narrowPeak
2010-10-20
2011-07-20
lab=Stanford; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2524; controlId=wgEncodeEH000706; labVersion=PeakSeq1.0. Because of the common difficulty in achieving strong signal with the GM12878 cell line, we submit this dataset, although it narrowly misses the peak concordance standard.; tableName=wgEncodeSydhTfbsGm12878Irf3IggmusPk; md5sum=16c07e6692536c56243b4faf6c4b6c2a;
GM12878
IRF3 (sc-9082)
None
Raw data
IgG-mus
exp
wgEncodeEH001809
GSM935651
784 MB
fastq
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2524; controlId=wgEncodeEH000706; md5sum=1355750990a2c1459a0f36fb3947b277;
GM12878
IRF3 (sc-9082)
None
Raw data
IgG-mus
exp
wgEncodeEH001809
GSM935651
973 MB
fastq
2010-10-20
2011-07-20
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2524; controlId=wgEncodeEH000706; md5sum=c6b2774b5f8f08adaf300d89466bb7ab;
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5259; controlId=wgEncodeEH000706; labVersion=This replaces a previous dataset for the cell line/antibody which was under sequenced due to technical limits at the time.; md5sum=aa3394239cfa9a26078c3a280efeb4c7;
GM12878
MAX (sc-197)
None
Alignments
IgG-mus
exp
wgEncodeEH002806
534 MB
bam
2011-12-18
2012-09-18
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5259; controlId=wgEncodeEH000706; labVersion=This replaces a previous dataset for the cell line/antibody which was under sequenced due to technical limits at the time.; md5sum=826719966d63c2475c37c7c55535b9f7;
GM12878
MAX (sc-197)
None
Alignments
IgG-mus
exp
wgEncodeEH002806
5.9 MB
bam.bai
2011-12-18
2012-09-18
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5259; controlId=wgEncodeEH000706; labVersion=This replaces a previous dataset for the cell line/antibody which was under sequenced due to technical limits at the time.; md5sum=9cdff6520dcfc3fa368f7be3629c7ba4;
GM12878
MAX (sc-197)
None
Alignments
IgG-mus
exp
wgEncodeEH002806
508 MB
bam
2011-12-18
2012-09-18
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5259; controlId=wgEncodeEH000706; labVersion=This replaces a previous dataset for the cell line/antibody which was under sequenced due to technical limits at the time.; md5sum=9cf9374fa8c6d93c84b0198f5b634ce0;
GM12878
MAX (sc-197)
None
Peaks
IgG-mus
exp
wgEncodeEH002806
GSM935518
785 KB
narrowPeak
2011-12-18
2012-09-18
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5259; controlId=wgEncodeEH000706; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsGm12878MaxIggmusPk; md5sum=333b325248282e3b6b391937a21bca85;
GM12878
MAX (sc-197)
None
Raw data
IgG-mus
exp
wgEncodeEH002806
GSM935518
871 MB
fastq.tgz
2011-12-18
2012-09-18
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5259; controlId=wgEncodeEH000706; labVersion=This replaces a previous dataset for the cell line/antibody which was under sequenced due to technical limits at the time.; md5sum=9e0c9299ad358e8f3770105ea6f20307;
GM12878
MAX (sc-197)
None
Raw data
IgG-mus
exp
wgEncodeEH002806
GSM935518
986 MB
fastq.tgz
2011-12-18
2012-09-18
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5259; controlId=wgEncodeEH000706; labVersion=This replaces a previous dataset for the cell line/antibody which was under sequenced due to technical limits at the time.; md5sum=9721c3305a0b17326519b40b9fcf12ab;
GM12878
MAX (sc-197)
None
Signal
IgG-mus
exp
wgEncodeEH002806
GSM935518
379 MB
bigWig
2011-12-18
2012-09-18
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5259; controlId=wgEncodeEH000706; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsGm12878MaxIggmusSig; md5sum=82ff6b69a53e9167e0118fb5decfd75e;
GM12878
MXI1 (AF4185)
None
Alignments
IgG-mus
exp
wgEncodeEH002026
5.9 MB
bam.bai
2011-06-29
2012-03-29
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4454; controlId=wgEncodeEH000706; md5sum=21aab0a759e704ee03885b25717736c0;
GM12878
MXI1 (AF4185)
None
Alignments
IgG-mus
exp
wgEncodeEH002026
645 MB
bam
2011-06-29
2012-03-29
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4454; controlId=wgEncodeEH000706; md5sum=214cf1a9dfced6421b60c56334e5e5f9;
GM12878
MXI1 (AF4185)
None
Alignments
IgG-mus
exp
wgEncodeEH002026
5.8 MB
bam.bai
2011-06-29
2012-03-29
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4454; controlId=wgEncodeEH000706; md5sum=f304ae4f56dc8298b84b470aa062d4ef;
GM12878
MXI1 (AF4185)
None
Alignments
IgG-mus
exp
wgEncodeEH002026
422 MB
bam
2011-06-29
2012-03-29
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4454; controlId=wgEncodeEH000706; md5sum=8c17c80a378815ea05c0a73de69df08f;
lab=Stanford; replicate=7; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1394; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=113404efdade41892de372ca83366303;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
220 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=7; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1394; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=d6ec5fcc7669935c34f522e2f6342f49;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
5.4 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=6; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-01-11; subId=5042; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=a8009822f832ca6f7befd7148ec04ce8;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
110 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=6; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-01-11; subId=5042; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=eb74d7f271e9aed6c8f2f316900a9e71;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Data paired with GM12878_IgG_Control.; md5sum=7adfe5ef261a5074896ef43263a4cabd;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
839 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Data paired with GM12878_IgG_Control.; md5sum=73a091e4c66231fba696810399acb1e5;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
5.6 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1392; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=f2f050e9e3ebfd547d67cc4535e69e6e;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
252 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1392; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=938a196875dabe07694e6eaef308f0cc;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
5.5 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=073db929d7aa7ff86973bc5e02559b67;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
199 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=ae39aad4ef08e51aba5fc84691de309b;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
5.5 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1378; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=ec3780b1eeef4664693eb2393736a725;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
226 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1378; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=d202ab81b94d9e1efca9e928977f87f6;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
5.5 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1367; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=d8182e53d2dd6bd48979408f32ff97eb;
GM12878
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000708
199 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1367; controlId=wgEncodeEH000706; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=0a3746183a82deed645674cec5dbbb37;
GM12878
POL2 (MMS-126R)
None
Alignments
Standard Control
exp
wgEncodeEH000626
5.4 MB
bam.bai
2009-02-24
2009-11-24
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-01-11; subId=5042; controlId=wgEncodeEH000625; labVersion=remapped from hg18; md5sum=01c091e72f69cb360c094cf9182357ca;
GM12878
POL2 (MMS-126R)
None
Alignments
Standard Control
exp
wgEncodeEH000626
94 MB
bam
2009-02-24
2009-11-24
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-01-11; subId=5042; controlId=wgEncodeEH000625; labVersion=remapped from hg18; md5sum=27bfe767700af43e68b3b7d1ff7cb1b6;
GM12878
POL2 (MMS-126R)
None
Alignments
Standard Control
exp
wgEncodeEH000626
5.6 MB
bam.bai
2009-02-24
2009-11-24
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1367; controlId=wgEncodeEH000625; labVersion=remapped from hg18; md5sum=afd440e6226e4be13ddf77705e771be3;
GM12878
POL2 (MMS-126R)
None
Alignments
Standard Control
exp
wgEncodeEH000626
295 MB
bam
2009-02-24
2009-11-24
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1367; controlId=wgEncodeEH000625; labVersion=remapped from hg18; md5sum=3686f77fb18b24d1c1ca939529eb0561;
GM12878
POL2 (MMS-126R)
None
Peaks
IgG-mus
exp
wgEncodeEH000708
GSM935386
358 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000706; tableName=wgEncodeSydhTfbsGm12878Pol2IggmusPk; md5sum=b4f62eb38ce26a32b3b1eb1fdbae0f2d;
GM12878
POL2 (MMS-126R)
None
Peaks
Standard Control
exp
wgEncodeEH000626
GSM935412
110 KB
narrowPeak
2011-06-03
2012-03-03
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000625; tableName=wgEncodeSydhTfbsGm12878Pol2StdPk; md5sum=baa946e99406eabeb4f24296985983bf;
GM12878
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000708
GSM935386
160 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=957; controlId=wgEncodeEH000706; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=edf25745594879f4b82c50b5067a7f88;
GM12878
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000708
GSM935386
162 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=957; controlId=wgEncodeEH000706; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=30578641eda3e3917ba71224cda1ee04;
GM12878
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000708
GSM935386
176 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=7; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=957; controlId=wgEncodeEH000706; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=6a236b4f767dc6df729ba4671f870fcf;
GM12878
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000708
GSM935386
180 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=957; controlId=wgEncodeEH000706; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=286d0a3bb659e46ae55bffd211f85a03;
GM12878
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000708
GSM935386
204 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=957; controlId=wgEncodeEH000706; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=ce00f2d669f97530a2f380fe12c0a870;
GM12878
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000708
GSM935386
233 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=6; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=957; controlId=wgEncodeEH000706; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=29e1c960d48bbc898b3144bfec1110f7;
GM12878
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000708
GSM935386
680 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=957; controlId=wgEncodeEH000706; labVersion=Data paired with GM12878_IgG_Control.; md5sum=a0a45be82bee0d1a0ab3500f96aecb9a;
GM12878
POL2 (MMS-126R)
None
Signal
IgG-mus
exp
wgEncodeEH000708
GSM935386
480 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000706; tableName=wgEncodeSydhTfbsGm12878Pol2IggmusSig; md5sum=3d8773c82debcdfad9bc0f4e2c1542a4;
GM12878
POL2 (MMS-126R)
None
Signal
Standard Control
exp
wgEncodeEH000626
GSM935412
275 MB
bigWig
2010-12-02
2011-09-01
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000625; tableName=wgEncodeSydhTfbsGm12878Pol2StdSig; md5sum=3cbbea1a057b67488089a73e8a7fd3ca;
GM12878
POL2 (phospho S2) (ab5095)
None
Alignments
IgG-mus
exp
wgEncodeEH001858
5.6 MB
bam.bai
2011-03-31
2011-12-31
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3870; controlId=wgEncodeEH000706; md5sum=c1821fcd037ed6f2eb1e3b01355246c9;
GM12878
POL2 (phospho S2) (ab5095)
None
Alignments
IgG-mus
exp
wgEncodeEH001858
324 MB
bam
2011-03-31
2011-12-31
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3870; controlId=wgEncodeEH000706; md5sum=2323218579d55421356780a7f0511b94;
GM12878
POL2 (phospho S2) (ab5095)
None
Alignments
IgG-mus
exp
wgEncodeEH001858
5.7 MB
bam.bai
2011-03-31
2011-12-31
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3870; controlId=wgEncodeEH000706; md5sum=c83a9bd25d29f94ac3342fc1fadefd0d;
GM12878
POL2 (phospho S2) (ab5095)
None
Alignments
IgG-mus
exp
wgEncodeEH001858
331 MB
bam
2011-03-31
2011-12-31
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3870; controlId=wgEncodeEH000706; md5sum=2c55b6b92555f0a1e03855e811d5fa4e;
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2529; controlId=wgEncodeEH000706; md5sum=1dc5a43bfeaef8a59aca0f33e1349e4b;
GM12878
STAT3 (sc-482)
None
Alignments
IgG-mus
exp
wgEncodeEH001811
357 MB
bam
2010-10-20
2011-07-20
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2529; controlId=wgEncodeEH000706; md5sum=b60b32a66ab8fff7278f07b16a156fab;
GM12878
STAT3 (sc-482)
None
Alignments
IgG-mus
exp
wgEncodeEH001811
5.7 MB
bam.bai
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2529; controlId=wgEncodeEH000706; md5sum=84ea171aa19148c7b1f58a5966bd6079;
GM12878
STAT3 (sc-482)
None
Alignments
IgG-mus
exp
wgEncodeEH001811
359 MB
bam
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2529; controlId=wgEncodeEH000706; md5sum=1ad1afd1bcddc44697172e5f47f1cb3a;
GM12878
STAT3 (sc-482)
None
Peaks
IgG-mus
exp
wgEncodeEH001811
GSM935557
433 KB
narrowPeak
2010-10-20
2011-07-20
lab=Stanford; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2529; controlId=wgEncodeEH000706; labVersion=PeakSeq1.0. Because of the common difficulty in achieving good signal strength with the GM12878 cell line, we submit this dataset although it narrowly missed the peak concordance standard.; tableName=wgEncodeSydhTfbsGm12878Stat3IggmusPk; md5sum=c2c36ab998bd7024678e17582e8852dc;
GM12878
STAT3 (sc-482)
None
Raw data
IgG-mus
exp
wgEncodeEH001811
GSM935557
828 MB
fastq
2010-10-20
2011-07-20
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2529; controlId=wgEncodeEH000706; md5sum=c48425e81a0f8c63920f4d5f675b1a5c;
GM12878
STAT3 (sc-482)
None
Raw data
IgG-mus
exp
wgEncodeEH001811
GSM935557
953 MB
fastq
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2529; controlId=wgEncodeEH000706; md5sum=fcbc281996aaa2e1c0c314632966bc3d;
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000625; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001), samples were 71% and 72% matching in the top 40% overlap analysis.; md5sum=d01ab3c11683bfe3c5104e4bbc611e1f;
GM12878
TR4
None
Alignments
Standard Control
exp
wgEncodeEH000697
1.2 GB
bam
2010-01-07
2010-10-07
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000625; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001), samples were 71% and 72% matching in the top 40% overlap analysis.; md5sum=3236ffaaff5e5c719444d8c107ca5c77;
GM12878
TR4
None
Alignments
Standard Control
exp
wgEncodeEH000697
5.9 MB
bam.bai
2010-01-07
2010-10-07
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1358; controlId=wgEncodeEH000625; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001), samples were 71% and 72% matching in the top 40% overlap analysis.; md5sum=48aa0d3776a26dc67654a6caacdbcbbb;
GM12878
TR4
None
Alignments
Standard Control
exp
wgEncodeEH000697
949 MB
bam
2010-01-07
2010-10-07
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1358; controlId=wgEncodeEH000625; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001), samples were 71% and 72% matching in the top 40% overlap analysis.; md5sum=b91dcf11ea16d71c0a80ee76010bd4ce;
GM12878
TR4
None
Peaks
Standard Control
exp
wgEncodeEH000697
GSM935480
37 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000625; tableName=wgEncodeSydhTfbsGm12878Tr4StdPk; md5sum=ce54a52e0a56b4f3a28f5745e69f9142;
GM12878
TR4
None
Raw data
Standard Control
exp
wgEncodeEH000697
GSM935480
720 MB
fastq
2010-01-07
2010-10-07
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=900; controlId=wgEncodeEH000625; labVersion=Fragmented using Bioruptor, precipitated with StaphA PeakSeq 1.0 (fdr 0.001), samples were 71% and 72% matching in the top 40% overlap analysis.; md5sum=ef29b0894efe82f72d8707b5580c5ace;
GM12878
TR4
None
Raw data
Standard Control
exp
wgEncodeEH000697
GSM935480
909 MB
fastq
2010-01-07
2010-10-07
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=900; controlId=wgEncodeEH000625; labVersion=Fragmented using Bioruptor, precipitated with StaphA PeakSeq 1.0 (fdr 0.001), samples were 71% and 72% matching in the top 40% overlap analysis.; md5sum=d98f6eeee0f015b32273fc58128fef65;
GM12878
TR4
None
Signal
Standard Control
exp
wgEncodeEH000697
GSM935480
427 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000625; tableName=wgEncodeSydhTfbsGm12878Tr4StdSig; md5sum=842bfaa487e655a831ce32dacd0a00e1;
GM12878
USF2 (ab60931)
None
Alignments
IgG-mus
exp
wgEncodeEH001812
5.7 MB
bam.bai
2010-10-20
2011-07-20
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2525; controlId=wgEncodeEH000706; md5sum=85f0b2b6dce0b73f2890f25bdb075b6a;
GM12878
USF2 (ab60931)
None
Alignments
IgG-mus
exp
wgEncodeEH001812
337 MB
bam
2010-10-20
2011-07-20
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2525; controlId=wgEncodeEH000706; md5sum=eb9bb94825abb7056bf7b4fbf2c41e3c;
GM12878
USF2 (ab60931)
None
Alignments
IgG-mus
exp
wgEncodeEH001812
5.7 MB
bam.bai
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2525; controlId=wgEncodeEH000706; md5sum=b450a1e6ef321bb42a1a1ef549fceb5e;
GM12878
USF2 (ab60931)
None
Alignments
IgG-mus
exp
wgEncodeEH001812
371 MB
bam
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2525; controlId=wgEncodeEH000706; md5sum=2cf347183509f1fc992eb5244a967a84;
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1178; controlId=wgEncodeEH000706; md5sum=11a4ab87aa48f402c8b4e54c22c9764f;
GM12878
WHIP (ab4731)
None
Alignments
IgG-mus
exp
wgEncodeEH001787
339 MB
bam
2010-04-26
2011-01-26
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1178; controlId=wgEncodeEH000706; md5sum=8b91130f9cca474b873481c37f998298;
GM12878
WHIP (ab4731)
None
Alignments
IgG-mus
exp
wgEncodeEH001787
5.7 MB
bam.bai
2010-04-26
2011-01-26
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1178; controlId=wgEncodeEH000706; md5sum=815b5757099ec7a2a68d44a86c185c5e;
GM12878
WHIP (ab4731)
None
Alignments
IgG-mus
exp
wgEncodeEH001787
335 MB
bam
2010-04-26
2011-01-26
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1178; controlId=wgEncodeEH000706; md5sum=ad6c1639ab12b9e7a339f44abab9b5f3;
GM12878
WHIP (ab4731)
None
Peaks
IgG-mus
exp
wgEncodeEH001787
GSM935492
1.4 MB
narrowPeak
2010-04-26
2011-01-26
lab=Stanford; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1178; controlId=wgEncodeEH000706; labVersion=PeakSeq1.0. Although this dataset barely misses the establish ENCODE standard for data agreement with 77% agreement between replicates instead of 80%, we have submitted it because it appears to be of high quality and because it is from the GM12878 cell line where we and others have generally observed weaker ChIP signal.; tableName=wgEncodeSydhTfbsGm12878WhipIggmusPk; md5sum=c6eff4ad100a09e63982e50993eea18d;
GM12878
WHIP (ab4731)
None
Raw data
IgG-mus
exp
wgEncodeEH001787
GSM935492
884 MB
fastq
2010-04-26
2011-01-26
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1178; controlId=wgEncodeEH000706; md5sum=bfa434e4db6870c4141de3cbacbf3337;
GM12878
WHIP (ab4731)
None
Raw data
IgG-mus
exp
wgEncodeEH001787
GSM935492
890 MB
fastq
2010-04-26
2011-01-26
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1178; controlId=wgEncodeEH000706; md5sum=e902b515ee3de1842faf708c3a0f69e2;
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000625; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with Staph A, PeakSeq 1.0 (fdr 0.001); md5sum=957006f9b535f01888fa30866587f550;
GM12878
YY1 (sc-1703)
None
Alignments
Standard Control
exp
wgEncodeEH000695
721 MB
bam
2009-12-20
2010-09-19
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000625; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with Staph A, PeakSeq 1.0 (fdr 0.001); md5sum=68b9eeff1db0e056820ef747b7daa3a3;
GM12878
YY1 (sc-1703)
None
Alignments
Standard Control
exp
wgEncodeEH000695
5.7 MB
bam.bai
2009-12-20
2010-09-19
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1358; controlId=wgEncodeEH000625; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with Staph A, PeakSeq 1.0 (fdr 0.001); md5sum=8f5845cb4a6fb51a190583b84106f0fb;
GM12878
YY1 (sc-1703)
None
Alignments
Standard Control
exp
wgEncodeEH000695
904 MB
bam
2009-12-20
2010-09-19
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1358; controlId=wgEncodeEH000625; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with Staph A, PeakSeq 1.0 (fdr 0.001); md5sum=0598bca3cebdea8c2a2c2216a5a1844a;
GM12878
YY1 (sc-1703)
None
Peaks
Standard Control
exp
wgEncodeEH000695
GSM935482
19 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000625; tableName=wgEncodeSydhTfbsGm12878Yy1StdPk; md5sum=6e441c8e5612b32ee2e38f67a413b2de;
GM12878
YY1 (sc-1703)
None
Raw data
Standard Control
exp
wgEncodeEH000695
GSM935482
629 MB
fastq
2009-12-20
2010-09-19
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=853; controlId=wgEncodeEH000625; labVersion=Fragmented using Bioruptor, precipitated with Staph A,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=c4f5e75a74a7f345ee17a19cb85f306f;
GM12878
YY1 (sc-1703)
None
Raw data
Standard Control
exp
wgEncodeEH000695
GSM935482
772 MB
fastq
2009-12-20
2010-09-19
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=853; controlId=wgEncodeEH000625; labVersion=Fragmented using Bioruptor, precipitated with Staph A,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=6a4911e5f68490ce13a8ff978aa3bc9d;
GM12878
YY1 (sc-1703)
None
Signal
Standard Control
exp
wgEncodeEH000695
GSM935482
280 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000625; tableName=wgEncodeSydhTfbsGm12878Yy1StdSig; md5sum=70f6e740dad969d2317cd5833aa7a170;
lab=USC; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1203; controlId=wgEncodeEH000625; labVersion=PeakSeq1.0. Replicate overlap below cutoff, but submitted because there are very few biologically real targets and all the targets are in heterochromatic regions.; tableName=wgEncodeSydhTfbsGm12878Znf274StdPk; md5sum=688fb1c47cd906afca9417bc2d4ef05a;
GM12878
ZNF274 (H00010782-A01)
None
Raw data
Standard Control
exp
wgEncodeEH001756
GSM935349
6.1 MB
fastq
2010-05-20
2011-02-20
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1203; controlId=wgEncodeEH000625; labVersion=Method of Chromatin Fragmentation: Sonication. Method of Immunoprecipitation: StaphA; md5sum=e3449788dc32de3beecf77a19a34b151;
GM12878
ZNF274 (H00010782-A01)
None
Raw data
Standard Control
exp
wgEncodeEH001756
GSM935349
444 MB
fastq
2010-05-20
2011-02-20
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1203; controlId=wgEncodeEH000625; labVersion=Method of Chromatin Fragmentation: Sonication. Method of Immunoprecipitation: StaphA; md5sum=340946b6cab67b7a72b0057a2a84f6ff;
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000709; labVersion=remapped from hg18; md5sum=b9896b0a8184892af9d628920b818690;
GM12891
Input
None
Alignments
IgG-mus
input
wgEncodeEH000709
537 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000709; labVersion=remapped from hg18; md5sum=33f7cdcee87042eb56300d2d427ab67d;
GM12891
Input
None
Alignments
IgG-mus
input
wgEncodeEH000709
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1367; controlId=wgEncodeEH000709; labVersion=remapped from hg18; md5sum=4fcf4abab00e491a62b7e22d56c51ec8;
GM12891
Input
None
Alignments
IgG-mus
input
wgEncodeEH000709
541 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1367; controlId=wgEncodeEH000709; labVersion=remapped from hg18; md5sum=862260a7cf61a5c544814004df093728;
GM12891
Input
None
Raw data
IgG-mus
input
wgEncodeEH000709
GSM935387
404 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=863; controlId=wgEncodeEH000709; md5sum=fb0a18ab162c050e87690fa4d0ac5490;
GM12891
Input
None
Raw data
IgG-mus
input
wgEncodeEH000709
GSM935387
405 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=863; controlId=wgEncodeEH000709; md5sum=8d989e1076d9c502cb458db26de03c5a;
GM12891
Input
None
Signal
IgG-mus
input
wgEncodeEH000709
GSM935387
330 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000709; tableName=wgEncodeSydhTfbsGm12891InputIggmusSig; md5sum=b7ab965229d9787db803d73eacd5ce86;
GM12891
Input
TNF-alpha
Alignments
IgG-rab
input
wgEncodeEH000772
5.7 MB
bam.bai
2010-03-05
2010-12-05
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000772; labVersion=remapped from hg18; md5sum=a2eb560c4aa3d3c1f33d950cc8268ef6;
GM12891
Input
TNF-alpha
Alignments
IgG-rab
input
wgEncodeEH000772
507 MB
bam
2010-03-05
2010-12-05
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000772; labVersion=remapped from hg18; md5sum=a220bae7528967b67241b91879c92047;
GM12891
Input
TNF-alpha
Alignments
IgG-rab
input
wgEncodeEH000772
5.7 MB
bam.bai
2010-03-05
2010-12-05
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1367; controlId=wgEncodeEH000772; labVersion=remapped from hg18; md5sum=b5b4ba72b0bee7fdeaaa6f8a78ae5025;
GM12891
Input
TNF-alpha
Alignments
IgG-rab
input
wgEncodeEH000772
653 MB
bam
2010-03-05
2010-12-05
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1367; controlId=wgEncodeEH000772; labVersion=remapped from hg18; md5sum=0c82dd554fe6aabd1810af7ef12cb625;
GM12891
Input
TNF-alpha
Raw data
IgG-rab
input
wgEncodeEH000772
GSM935453
419 MB
fastq
2010-03-05
2010-12-05
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1111; controlId=wgEncodeEH000772; md5sum=f40b253cf7c100c04db10a76f281f8a3;
GM12891
Input
TNF-alpha
Raw data
IgG-rab
input
wgEncodeEH000772
GSM935453
510 MB
fastq
2010-03-05
2010-12-05
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1111; controlId=wgEncodeEH000772; md5sum=e3cdc7509abcdb465db6b1cb6cca1ef4;
GM12891
Input
TNF-alpha
Signal
IgG-rab
input
wgEncodeEH000772
GSM935453
332 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000772; tableName=wgEncodeSydhTfbsGm12891InputTnfaIggrabSig; md5sum=d5b3223e799675cba41f894832e29154;
GM12891
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000735
5.8 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000772; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=5cda43a52ec67111bb97a5740f3f325b;
GM12891
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000735
818 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000772; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=0692333d838b84387f6099f4a5183fb6;
GM12891
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000735
5.9 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000772; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=ad7b976a941736d278f645f80944fd50;
GM12891
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000735
1.2 GB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000772; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=1edb476603e3f4595fc2c4e5527b1c93;
GM12891
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000735
5.9 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1367; controlId=wgEncodeEH000772; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=c99de5f1a323044b646fe182ba5a9137;
GM12891
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000735
1.1 GB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1367; controlId=wgEncodeEH000772; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=609cfe2014ef9c502887165066c35609;
GM12891
NFKB (sc-372)
TNF-alpha
Peaks
IgG-rab
exp
wgEncodeEH000735
GSM935526
207 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000772; tableName=wgEncodeSydhTfbsGm12891NfkbTnfaIggrabPk; md5sum=e82f6f7a82a789adc1d6be447f821d2d;
GM12891
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000735
GSM935526
636 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1051; controlId=wgEncodeEH000772; labVersion=Data paired with GM12891_IgG_Control.; md5sum=41b79b887626a2cce1e9a9d0566f06a0;
GM12891
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000735
GSM935526
856 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1051; controlId=wgEncodeEH000772; labVersion=Data paired with GM12891_IgG_Control.; md5sum=e90e6b3d8488c6ae39552f0f4e2a8a85;
GM12891
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000735
GSM935526
1.0 GB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1051; controlId=wgEncodeEH000772; labVersion=Data paired with GM12891_IgG_Control.; md5sum=d1c638a973bfbbc6d1891d66183328e7;
GM12891
NFKB (sc-372)
TNF-alpha
Signal
IgG-rab
exp
wgEncodeEH000735
GSM935526
474 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000772; tableName=wgEncodeSydhTfbsGm12891NfkbTnfaIggrabSig; md5sum=6e630cf3121dce54dc10752f52c70eed;
GM12891
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000710
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=6; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1394; controlId=wgEncodeEH000709; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=eed81b64e89a243e022f53f8669cd5f7;
GM12891
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000710
523 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=6; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1394; controlId=wgEncodeEH000709; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=196b6840c5325f69fb62b3b4717545cf;
GM12891
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000710
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000709; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=831788b367f7ba5b4c61177944314df2;
GM12891
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000710
530 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000709; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=af6848822bcf6665639d2563639bd399;
GM12891
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000710
5.6 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000709; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=c54be5ac46bf2727907b283a3447fb3c;
GM12891
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000710
458 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000709; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=ae1876f3d5dc2035d64c6bda8513d818;
GM12891
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000710
5.9 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000709; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=c8abc4ada2b4d0115896e4acf995ec27;
GM12891
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000710
857 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000709; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=194ad6fb43c1d5e70213c8ab976d1657;
GM12891
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000710
5.8 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000709; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=a9e7afbfbe59ceddaea1321f1e17155d;
GM12891
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000710
827 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000709; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=8928590d5106d3011ed66d1e017aeaea;
GM12891
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000710
5.8 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1367; controlId=wgEncodeEH000709; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=49daaab2c151ddd2e991405fae686013;
GM12891
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000710
831 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1367; controlId=wgEncodeEH000709; labVersion=remapped from hg18, Data paired with GM12891_IgG_Control.; md5sum=2e40210775721688cad9a7bdf496ff21;
GM12891
POL2 (MMS-126R)
None
Peaks
IgG-mus
exp
wgEncodeEH000710
GSM935287
366 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000709; tableName=wgEncodeSydhTfbsGm12891Pol2IggmusPk; md5sum=a4772896ff1618c7513bb9edc3a2bb8d;
GM12891
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000710
GSM935287
342 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=865; controlId=wgEncodeEH000709; labVersion=Data paired with GM12891_IgG_Control.; md5sum=dc6c29a3adcb0ecf05c7dc06801919d9;
GM12891
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000710
GSM935287
397 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=6; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=865; controlId=wgEncodeEH000709; labVersion=Data paired with GM12891_IgG_Control.; md5sum=6acb7caf14774559d205e12084642cbe;
GM12891
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000710
GSM935287
401 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=865; controlId=wgEncodeEH000709; labVersion=Data paired with GM12891_IgG_Control.; md5sum=4b2104789fba955bb62a17dfc80fa226;
GM12891
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000710
GSM935287
652 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=865; controlId=wgEncodeEH000709; labVersion=Data paired with GM12891_IgG_Control.; md5sum=146c3566d7a70d8d47997289ad584407;
GM12891
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000710
GSM935287
661 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=865; controlId=wgEncodeEH000709; labVersion=Data paired with GM12891_IgG_Control.; md5sum=6d71f4be9cff78bc0dd9e0df365d74fd;
GM12891
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000710
GSM935287
670 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=865; controlId=wgEncodeEH000709; labVersion=Data paired with GM12891_IgG_Control.; md5sum=dcd88af9c44ee71c329fcd95546aa37d;
GM12891
POL2 (MMS-126R)
None
Signal
IgG-mus
exp
wgEncodeEH000710
GSM935287
563 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000709; tableName=wgEncodeSydhTfbsGm12891Pol2IggmusSig; md5sum=e07cd9ed3770a0161bc81ee2bf3a0fd0;
GM12892
Input
None
Alignments
IgG-mus
input
wgEncodeEH000711
5.5 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000711; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=2cfc032c0252a2f1993586a82f3d6b63;
GM12892
Input
None
Alignments
IgG-mus
input
wgEncodeEH000711
354 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000711; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=e77b46a71d7c1091d25b1eb334ed74b0;
GM12892
Input
None
Alignments
IgG-mus
input
wgEncodeEH000711
5.6 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000711; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=d38d986b0c2006560284e9535bf021d1;
GM12892
Input
None
Alignments
IgG-mus
input
wgEncodeEH000711
232 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000711; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=d4bd76edbbf787b493c7242a87c265b6;
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000773; tableName=wgEncodeSydhTfbsGm12892InputTnfaIggrabSig; md5sum=e68d5573b6627c4fe47ab4e9f686977a;
GM12892
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000712
5.6 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000773; labVersion=remapped from hg18, Data paired with IgG_Control; md5sum=b04aa97b33e82f08dcc5b0220341d2c0;
GM12892
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000712
243 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000773; labVersion=remapped from hg18, Data paired with IgG_Control; md5sum=20c398ae669b534792975376121209b8;
GM12892
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000712
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000773; labVersion=remapped from hg18, Data paired with IgG_Control; md5sum=7735a29e55fc32a6da7d92b526a50185;
GM12892
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000712
433 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000773; labVersion=remapped from hg18, Data paired with IgG_Control; md5sum=0ff762dd81250312bddecbff8df95b07;
GM12892
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000712
5.6 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000773; labVersion=remapped from hg18, Data paired with IgG_Control; md5sum=d1bc9dfb98c4bf75f7befc3be1c7b303;
GM12892
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000712
328 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000773; labVersion=remapped from hg18, Data paired with IgG_Control; md5sum=6b7cb92f997238922069af6bb17c2e16;
GM12892
NFKB (sc-372)
TNF-alpha
Peaks
IgG-rab
exp
wgEncodeEH000712
GSM935285
64 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000773; tableName=wgEncodeSydhTfbsGm12892NfkbTnfaIggrabPk; md5sum=eebf30cb40f074aa1eac4ca3cd35a36b;
GM12892
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000712
GSM935285
190 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=941; controlId=wgEncodeEH000773; labVersion=Data paired with IgG_Control; md5sum=40d36e76c32ac894ec6dd82a2bff6ce1;
GM12892
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000712
GSM935285
251 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=941; controlId=wgEncodeEH000773; labVersion=Data paired with IgG_Control; md5sum=ee8e125ac1d03559c79b40dd468ee32c;
GM12892
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000712
GSM935285
334 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=941; controlId=wgEncodeEH000773; labVersion=Data paired with IgG_Control; md5sum=87321e8d9e46fc61805bb4099e32b159;
GM12892
NFKB (sc-372)
TNF-alpha
Signal
IgG-rab
exp
wgEncodeEH000712
GSM935285
399 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000773; tableName=wgEncodeSydhTfbsGm12892NfkbTnfaIggrabSig; md5sum=a3d651c9c78e362927aded74438a9f7e;
GM12892
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000729
5.5 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000711; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12892_IgG_Control.; md5sum=7d5a65249dd650957650dcff03ee802b;
GM12892
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000729
231 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000711; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12892_IgG_Control.; md5sum=07589049f9e3994361c1a6bf9920aa3d;
GM12892
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000729
5.6 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000711; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12892_IgG_Control.; md5sum=41324ca732b050f98c470526cf756a23;
GM12892
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000729
521 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1379; controlId=wgEncodeEH000711; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12892_IgG_Control.; md5sum=a348bdaff509041b48c84880dda55374;
GM12892
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000729
5.6 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000711; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12892_IgG_Control.; md5sum=712584b472dafd8f0a1a4e4e56a3b227;
GM12892
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000729
389 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000711; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12892_IgG_Control.; md5sum=825f4fd0307d9645eef6902741460f3e;
GM12892
POL2 (MMS-126R)
None
Peaks
IgG-mus
exp
wgEncodeEH000729
GSM935640
279 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000711; tableName=wgEncodeSydhTfbsGm12892Pol2IggmusPk; md5sum=2e32ebab0453efd443c07b09072829e1;
GM12892
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000729
GSM935640
189 MB
fastq
2010-01-13
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1008; controlId=wgEncodeEH000711; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12892_IgG_Control.; md5sum=a7ca7ccbe8864118ba600124b12a5653;
GM12892
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000729
GSM935640
295 MB
fastq
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1008; controlId=wgEncodeEH000711; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12892_IgG_Control.; md5sum=188bf65572172447a0edbe666995330d;
GM12892
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000729
GSM935640
409 MB
fastq
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1008; controlId=wgEncodeEH000711; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12892_IgG_Control.; md5sum=db9872b87ad81bcf36ce42e21edea356;
GM12892
POL2 (MMS-126R)
None
Signal
IgG-mus
exp
wgEncodeEH000729
GSM935640
301 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000711; tableName=wgEncodeSydhTfbsGm12892Pol2IggmusSig; md5sum=f23b66f5b5c626e8be3b4dc4167d06b3;
GM15510
Input
None
Alignments
IgG-mus
input
wgEncodeEH000713
5.6 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000713; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=c17706c1a261c18a57840e15fe17057b;
GM15510
Input
None
Alignments
IgG-mus
input
wgEncodeEH000713
213 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000713; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=1ab92d818ee706dfda3ddcac9c8173d5;
GM15510
Input
None
Alignments
IgG-mus
input
wgEncodeEH000713
5.8 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000713; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=6fc1d45cfcb1f26547073e0fcd7e1151;
GM15510
Input
None
Alignments
IgG-mus
input
wgEncodeEH000713
1.0 GB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000713; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=f61b57131df678caf86653bab647e284;
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000774; tableName=wgEncodeSydhTfbsGm15510InputTnfaIggrabSig; md5sum=d4ac16a8617b10d03d77d98a734a8447;
GM15510
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000736
5.8 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1394; controlId=wgEncodeEH000774; labVersion=remapped from hg18, Data paired with GM15510_IgG_Control.; md5sum=4c6d87ffce4ff505d16ec32b1802cb26;
GM15510
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000736
744 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1394; controlId=wgEncodeEH000774; labVersion=remapped from hg18, Data paired with GM15510_IgG_Control.; md5sum=4c34bf62fbf6e655625d54cb8dc054ef;
GM15510
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000736
5.8 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000774; labVersion=remapped from hg18, Data paired with GM15510_IgG_Control.; md5sum=9c9ff6ad1b45816cdd8b3343cd6971f0;
GM15510
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000736
707 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000774; labVersion=remapped from hg18, Data paired with GM15510_IgG_Control.; md5sum=6796245115b462ad0080d9489dabb11a;
GM15510
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000736
5.6 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000774; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=d350183b3fdbd2aa0a72ba0ae1295760;
GM15510
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000736
225 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000774; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=27872500c494746c5c37325e6b5559d8;
GM15510
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000736
5.7 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000774; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=af01d00af27bbabd07bbac681440f6a0;
GM15510
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000736
368 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000774; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=d514fff281b32a451f3b03c87cbe16f9;
GM15510
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000736
5.8 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000774; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=709f405472eb2dd9cd602f057762f5ea;
GM15510
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000736
462 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000774; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=3a33dc9b81b81aba305529a54737e613;
GM15510
NFKB (sc-372)
TNF-alpha
Peaks
IgG-rab
exp
wgEncodeEH000736
GSM935529
214 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000774; tableName=wgEncodeSydhTfbsGm15510NfkbTnfaIggrabPk; md5sum=294b10a8f6b64c8bced4e1542909231a;
GM15510
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000736
GSM935529
176 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1052; controlId=wgEncodeEH000774; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=0fbeb39f22d4753f4a3135c5feac2cf0;
GM15510
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000736
GSM935529
277 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1052; controlId=wgEncodeEH000774; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=362f8398c91f2849c9042d7091bcc2fd;
GM15510
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000736
GSM935529
359 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1052; controlId=wgEncodeEH000774; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=7a5dbc83b53c97a099a69a8af16d75bd;
GM15510
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000736
GSM935529
543 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1052; controlId=wgEncodeEH000774; labVersion=Data paired with GM15510_IgG_Control.; md5sum=3f2ae96516787d95b7cf9284f06ff090;
GM15510
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000736
GSM935529
574 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1052; controlId=wgEncodeEH000774; labVersion=Data paired with GM15510_IgG_Control.; md5sum=1a090169f5ef60341987f749773a7774;
GM15510
NFKB (sc-372)
TNF-alpha
Signal
IgG-rab
exp
wgEncodeEH000736
GSM935529
553 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000774; tableName=wgEncodeSydhTfbsGm15510NfkbTnfaIggrabSig; md5sum=f37bea45efc33ffe654ffe55d1818747;
GM15510
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000714
5.5 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000713; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=2a401d3ca086e549b9469f768b20bc37;
GM15510
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000714
150 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1389; controlId=wgEncodeEH000713; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=e70b7515b864ff31cc66615ed51fc169;
GM15510
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000714
5.5 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000713; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=3813d3165ecf5a334fd60561710cedea;
GM15510
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000714
197 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000713; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=4f8627064e48e5e6aa23aacb4259903c;
GM15510
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000714
5.5 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000713; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=60eaa027169b04a3ef5c1a03d18daf25;
GM15510
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000714
184 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000713; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=8b1299e1dd79ed8b023bd80d4b22d112;
GM15510
POL2 (MMS-126R)
None
Peaks
IgG-mus
exp
wgEncodeEH000714
GSM935291
312 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000713; tableName=wgEncodeSydhTfbsGm15510Pol2IggmusPk; md5sum=2454a58c3ca4573d62fdd07f36fce4f8;
GM15510
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000714
GSM935291
122 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=997; controlId=wgEncodeEH000713; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=2cc3f44c30b70b57cae2e120b00e835d;
GM15510
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000714
GSM935291
155 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=997; controlId=wgEncodeEH000713; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=db76628c826427937ecf3a15c211f75a;
GM15510
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000714
GSM935291
169 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=997; controlId=wgEncodeEH000713; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; md5sum=d4aa580f76fb7e41410709729ebd5a63;
GM15510
POL2 (MMS-126R)
None
Signal
IgG-mus
exp
wgEncodeEH000714
GSM935291
183 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000713; tableName=wgEncodeSydhTfbsGm15510Pol2IggmusSig; md5sum=6b9869c6f9b499ca603bf57405083e06;
GM18505
Input
None
Alignments
IgG-mus
input
wgEncodeEH000730
5.6 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000730; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=daed383756777fb0bd1d90e5c9ae3e46;
GM18505
Input
None
Alignments
IgG-mus
input
wgEncodeEH000730
229 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000730; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=667a3946278bf8a9462af442c928e4c7;
GM18505
Input
None
Alignments
IgG-mus
input
wgEncodeEH000730
5.5 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000730; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=a7743beebfabce7f7521051645ab58b7;
GM18505
Input
None
Alignments
IgG-mus
input
wgEncodeEH000730
187 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1368; controlId=wgEncodeEH000730; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=05b73169357021e24ebe237e307c7bdb;
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000775; tableName=wgEncodeSydhTfbsGm18505InputTnfaIggrabSig; md5sum=8650f53385899aa0f88b9be870ed79cf;
GM18505
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000715
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1394; controlId=wgEncodeEH000775; labVersion=remapped from hg18, Data paired with GM18505_IgG_Control; md5sum=f8214f2f7d0ca9aefd2c5e5d89d69c83;
GM18505
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000715
758 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1394; controlId=wgEncodeEH000775; labVersion=remapped from hg18, Data paired with GM18505_IgG_Control; md5sum=3ab41b4f2b5aae7b749c66e742966023;
GM18505
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000715
5.6 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000775; labVersion=remapped from hg18, Data paired with GM18505_IgG_Control; md5sum=4d3ba0e50c6ab7fdc2f6738867c0c5fb;
GM18505
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000715
341 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000775; labVersion=remapped from hg18, Data paired with GM18505_IgG_Control; md5sum=cee42544ae9ea07f98fc809b01aaa0a6;
GM18505
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000715
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000775; labVersion=remapped from hg18, Data paired with GM18505_IgG_Control; md5sum=d9716a4ffe6faae51942a8d58b1d5902;
GM18505
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000715
797 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000775; labVersion=remapped from hg18, Data paired with GM18505_IgG_Control; md5sum=238a864f1b2881a2bb369a280c44c3d8;
GM18505
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000715
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000775; labVersion=remapped from hg18, Data paired with GM18505_IgG_Control; md5sum=704b9eb3029f4663f32f135cde52cc12;
GM18505
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000715
431 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000775; labVersion=remapped from hg18, Data paired with GM18505_IgG_Control; md5sum=709993fad2da66434d6112bb51754ad7;
GM18505
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000715
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000775; labVersion=remapped from hg18, Data paired with GM18505_IgG_Control; md5sum=dc79168453053008834dce9fa43d2bf2;
GM18505
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000715
543 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000775; labVersion=remapped from hg18, Data paired with GM18505_IgG_Control; md5sum=88173b4611118d2887c4addadbf15db1;
GM18505
NFKB (sc-372)
TNF-alpha
Peaks
IgG-rab
exp
wgEncodeEH000715
GSM935282
131 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000775; tableName=wgEncodeSydhTfbsGm18505NfkbTnfaIggrabPk; md5sum=017c0682971b80bde5ff085176390d09;
GM18505
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000715
GSM935282
246 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=945; controlId=wgEncodeEH000775; labVersion=Data paired with GM18505_IgG_Control; md5sum=710c71cf27aec08aa05abbdba383a0ee;
GM18505
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000715
GSM935282
334 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=945; controlId=wgEncodeEH000775; labVersion=Data paired with GM18505_IgG_Control; md5sum=3aa4d89a251799819e20d7fe36370000;
GM18505
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000715
GSM935282
423 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=945; controlId=wgEncodeEH000775; labVersion=Data paired with GM18505_IgG_Control; md5sum=10bc134d4c5675ce9ae169505ad1d0b7;
GM18505
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000715
GSM935282
594 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=5; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=945; controlId=wgEncodeEH000775; labVersion=Data paired with GM18505_IgG_Control; md5sum=e1f6ba7705dd6a119095d48bcdc821f9;
GM18505
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000715
GSM935282
627 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=945; controlId=wgEncodeEH000775; labVersion=Data paired with GM18505_IgG_Control; md5sum=931ef7f794c4f8f9326f253984f304e8;
GM18505
NFKB (sc-372)
TNF-alpha
Signal
IgG-rab
exp
wgEncodeEH000715
GSM935282
545 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000775; tableName=wgEncodeSydhTfbsGm18505NfkbTnfaIggrabSig; md5sum=c59ef8921e086cee707f24def3f67175;
GM18505
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000731
5.7 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000730; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; md5sum=f395d588c2a5bc6f6eabd1c81c8eca54;
GM18505
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000731
1009 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000730; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; md5sum=f54aa6773ff20c4a93eb9409e50f74f1;
GM18505
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000731
5.5 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000730; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; md5sum=ec4725ba8f5453f4d41546a9533fe481;
GM18505
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000731
233 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000730; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; md5sum=19731bf53a1ac75655641cea26c65172;
GM18505
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000731
5.5 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000730; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; md5sum=933d975813bd06e6ca65335636b0eb9a;
GM18505
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000731
507 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000730; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; md5sum=081316109f3674cac1afcefe3c50320f;
GM18505
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000731
5.6 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000730; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; md5sum=078c946a24aad49ae0fb7eeecc5ad50c;
GM18505
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000731
637 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000730; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; md5sum=b4a24d8e4ea7a478df188c88b18bc977;
GM18505
POL2 (MMS-126R)
None
Peaks
IgG-mus
exp
wgEncodeEH000731
GSM935522
323 KB
narrowPeak
2011-06-09
2012-03-09
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4313; controlId=wgEncodeEH000730; tableName=wgEncodeSydhTfbsGm18505Pol2IggmusPk; md5sum=a1f5cc5f36809497e6b78c08c4972953;
GM18505
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000731
GSM935522
190 MB
fastq
2010-01-13
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1016; controlId=wgEncodeEH000730; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; md5sum=52f01b797094cc6c5f7ebe9853c310a2;
GM18505
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000731
GSM935522
432 MB
fastq
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1016; controlId=wgEncodeEH000730; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; md5sum=b43b41b049753d687d6ad4f0a3556a7e;
GM18505
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000731
GSM935522
502 MB
fastq
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1016; controlId=wgEncodeEH000730; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; md5sum=36679d52ff6424d0b95cdedee4446cf6;
GM18505
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000731
GSM935522
813 MB
fastq
2010-01-13
2010-10-13
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1016; controlId=wgEncodeEH000730; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; md5sum=8c7ff3d7154224392a83693a0ea8e9d2;
GM18505
POL2 (MMS-126R)
None
Signal
IgG-mus
exp
wgEncodeEH000731
GSM935522
394 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000730; tableName=wgEncodeSydhTfbsGm18505Pol2IggmusSig; md5sum=916984b318fcf13a305db592b0a68919;
GM18526
Input
None
Alignments
IgG-mus
input
wgEncodeEH000732
5.9 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000732; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=235892e7784f30cb1f3356f171def3a2;
GM18526
Input
None
Alignments
IgG-mus
input
wgEncodeEH000732
801 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000732; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=c80fab92d4f47f79ac65a6d40f3b16a0;
GM18526
Input
None
Alignments
IgG-mus
input
wgEncodeEH000732
5.6 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000732; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=dad7bbf6cbf0221e2559f788cfb893a6;
GM18526
Input
None
Alignments
IgG-mus
input
wgEncodeEH000732
259 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000732; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=e6beb626e3aa66a6fc5e490e3fcf6228;
GM18526
Input
None
Alignments
IgG-mus
input
wgEncodeEH000732
5.5 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000732; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=65d95384ee18f82de795a0b4616a77e6;
GM18526
Input
None
Alignments
IgG-mus
input
wgEncodeEH000732
177 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000732; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=92eb0ac5f001d650b8aeee54ba436610;
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000776; tableName=wgEncodeSydhTfbsGm18526InputTnfaIggrabSig; md5sum=4eb2393a5ada39b26f2707845291067a;
GM18526
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000716
5.6 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000776; labVersion=remapped from hg18, Data paired with GM18526_IgG_Control; md5sum=0c97d5c5684e95f29dea94490bba9818;
GM18526
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000716
206 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000776; labVersion=remapped from hg18, Data paired with GM18526_IgG_Control; md5sum=e4f8dedd3f3168e5a80d37d4b5553592;
GM18526
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000716
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000776; labVersion=remapped from hg18, Data paired with GM18526_IgG_Control; md5sum=045435eea4700d9bc1e64b60225a5f0d;
GM18526
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000716
404 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1380; controlId=wgEncodeEH000776; labVersion=remapped from hg18, Data paired with GM18526_IgG_Control; md5sum=4d98734fd4ef2f8e4b751c28f7ca2694;
GM18526
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000716
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000776; labVersion=remapped from hg18, Data paired with GM18526_IgG_Control; md5sum=8f9f4fecaaf35f24eb0b4b79f79ae7aa;
GM18526
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000716
478 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000776; labVersion=remapped from hg18, Data paired with GM18526_IgG_Control; md5sum=7d65cd5dc07eb9490d384389f2a55eea;
GM18526
NFKB (sc-372)
TNF-alpha
Peaks
IgG-rab
exp
wgEncodeEH000716
GSM935281
45 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000776; tableName=wgEncodeSydhTfbsGm18526NfkbTnfaIggrabPk; md5sum=9e8b38b986e86af65ed46549f814d913;
GM18526
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000716
GSM935281
159 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=942; controlId=wgEncodeEH000776; labVersion=Data paired with GM18526_IgG_Control; md5sum=da3cfc82014f165134f49ae3d98b165d;
GM18526
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000716
GSM935281
314 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=942; controlId=wgEncodeEH000776; labVersion=Data paired with GM18526_IgG_Control; md5sum=4e4a76bec0d7756184065cde525ddd56;
GM18526
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000716
GSM935281
369 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=942; controlId=wgEncodeEH000776; labVersion=Data paired with GM18526_IgG_Control; md5sum=55b2bc3c3fc0f7321ccc57a72b46a11f;
GM18526
NFKB (sc-372)
TNF-alpha
Signal
IgG-rab
exp
wgEncodeEH000716
GSM935281
407 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000776; tableName=wgEncodeSydhTfbsGm18526NfkbTnfaIggrabSig; md5sum=1661bd610eccd4fab8c4bfc04cf54499;
GM18526
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000733
5.5 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000732; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=78c195bda7ab857a9e261cb2e4bc8684;
GM18526
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000733
170 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000732; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=d7fa299cef77f4279f0534bf41cedb21;
GM18526
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000733
5.5 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1381; controlId=wgEncodeEH000732; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=769479bfc5935bf5941c885ac406b99e;
GM18526
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000733
152 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1381; controlId=wgEncodeEH000732; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=da5dfbb75c223d8f84704e475bf9fb7e;
GM18526
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000733
5.5 MB
bam.bai
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000732; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=f4a5836cb6557898f1ab563c7499296a;
GM18526
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000733
165 MB
bam
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000732; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=a0a1caf86203e19c8acfae27e17a78cd;
GM18526
POL2 (MMS-126R)
None
Peaks
IgG-mus
exp
wgEncodeEH000733
GSM935524
232 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000732; tableName=wgEncodeSydhTfbsGm18526Pol2IggmusPk; md5sum=f53e30f3cb283bf328f6d3af0259293a;
GM18526
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000733
GSM935524
123 MB
fastq
2010-01-13
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1024; controlId=wgEncodeEH000732; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=c484bbaf5da6e6dc9c5241453b595215;
GM18526
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000733
GSM935524
139 MB
fastq
2010-01-13
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1024; controlId=wgEncodeEH000732; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=9c7fbc64eaf772d204855a0884a23efe;
GM18526
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000733
GSM935524
141 MB
fastq
2010-01-13
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1024; controlId=wgEncodeEH000732; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; md5sum=5b6c909c7540e15244a0b022b1e119b3;
GM18526
POL2 (MMS-126R)
None
Signal
IgG-mus
exp
wgEncodeEH000733
GSM935524
159 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000732; tableName=wgEncodeSydhTfbsGm18526Pol2IggmusSig; md5sum=e82ae53b1ceb87240d8129e59cf6e551;
GM18951
Input
None
Alignments
IgG-mus
input
wgEncodeEH000737
5.9 MB
bam.bai
2010-01-14
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000737; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=d2525cd25fb7eb7bf74adc6d2e086529;
GM18951
Input
None
Alignments
IgG-mus
input
wgEncodeEH000737
840 MB
bam
2010-01-14
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000737; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=28c8b059b09f27090ef5338546da252f;
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000777; tableName=wgEncodeSydhTfbsGm18951InputTnfaIggrabSig; md5sum=c62043886b963c2ae9c14bb5c53a1e35;
GM18951
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000738
5.7 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000777; labVersion=remapped from hg18, Data paired with GM18951_IgG_Control.; md5sum=aebf6c89229723fe565485418390d812;
GM18951
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000738
690 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000777; labVersion=remapped from hg18, Data paired with GM18951_IgG_Control.; md5sum=6846f416f2d16b56b9ca96909d81b409;
GM18951
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000738
5.6 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000777; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18951_IgG_Control.; md5sum=f0be0562cf480bf0e90f55e1df25e5ae;
GM18951
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000738
363 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000777; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18951_IgG_Control.; md5sum=f18b040f0c9d61b553a1a20d684d4b81;
GM18951
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000738
5.8 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1381; controlId=wgEncodeEH000777; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18951_IgG_Control.; md5sum=ccccd5d11fc6f837a6a16c41159d1774;
GM18951
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000738
937 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1381; controlId=wgEncodeEH000777; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18951_IgG_Control.; md5sum=0d39ef7706e26073452908d25b5e9f65;
GM18951
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000738
5.5 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000777; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18951_IgG_Control.; md5sum=01a083b6c015848571a4d5010e5aff26;
GM18951
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000738
178 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000777; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM18951_IgG_Control.; md5sum=0ab5ab8e2a7765699fa824de77b00c9e;
GM18951
NFKB (sc-372)
TNF-alpha
Peaks
IgG-rab
exp
wgEncodeEH000738
GSM935531
271 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000777; tableName=wgEncodeSydhTfbsGm18951NfkbTnfaIggrabPk; md5sum=2039e0202a25d5aa07c6053f3647f416;
GM18951
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000738
GSM935531
136 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1053; controlId=wgEncodeEH000777; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18951_IgG_Control.; md5sum=e95c8c67adb9360168e1c6641f4588fb;
GM18951
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000738
GSM935531
284 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1053; controlId=wgEncodeEH000777; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18951_IgG_Control.; md5sum=9095467851bf05174053e83a56cd55c7;
GM18951
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000738
GSM935531
528 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1053; controlId=wgEncodeEH000777; labVersion=Data paired with GM18951_IgG_Control.; md5sum=04d8f4c8ea33f92a0e704baf8163c1c7;
GM18951
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000738
GSM935531
714 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1053; controlId=wgEncodeEH000777; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18951_IgG_Control.; md5sum=66ac00b2901f33e2ae1aaef7b82c3170;
GM18951
NFKB (sc-372)
TNF-alpha
Signal
IgG-rab
exp
wgEncodeEH000738
GSM935531
487 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000777; tableName=wgEncodeSydhTfbsGm18951NfkbTnfaIggrabSig; md5sum=26b0ab6d893a040d9fe4aae08db42cf4;
GM18951
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000739
5.5 MB
bam.bai
2010-01-14
2010-10-13
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000737; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded.; md5sum=7c5aa5947e2a67f84ed03433add2de36;
GM18951
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000739
159 MB
bam
2010-01-14
2010-10-13
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000737; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded.; md5sum=aaebddf02afa39502a28a4054d4922a8;
GM18951
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000739
5.5 MB
bam.bai
2010-01-14
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000737; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded.; md5sum=54b5d1dd683d1020547278818fb87e17;
GM18951
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000739
346 MB
bam
2010-01-14
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000737; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded.; md5sum=aec3ac44766f1f5b4de769b191c1ccc1;
GM18951
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000739
5.5 MB
bam.bai
2010-01-14
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1381; controlId=wgEncodeEH000737; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded.; md5sum=714ef5e6833447d18ba361094cc69eb5;
GM18951
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000739
248 MB
bam
2010-01-14
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1381; controlId=wgEncodeEH000737; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded.; md5sum=92e0a8655b4f2cf3d4fb037880e6a3f9;
GM18951
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000739
5.4 MB
bam.bai
2010-01-14
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000737; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded.; md5sum=93487c1a1ac94eb6e65bb6f2c326a6a7;
GM18951
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000739
241 MB
bam
2010-01-14
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1369; controlId=wgEncodeEH000737; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded.; md5sum=a8608c58ccf72be1403a5029118eeeb5;
GM18951
POL2 (MMS-126R)
None
Peaks
IgG-mus
exp
wgEncodeEH000739
GSM935530
312 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000737; tableName=wgEncodeSydhTfbsGm18951Pol2IggmusPk; md5sum=1cbbc33cf4b67b629bad45a55c31cd55;
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000778; tableName=wgEncodeSydhTfbsGm19099InputTnfaIggrabSig; md5sum=9543ff42ce372d504bd0dc39eaafa057;
GM19099
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000717
5.6 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000778; labVersion=remapped from hg18, Data paired with GM19099_IgG_Control; md5sum=51f82d4eb56831c5f3c0b57bb904e496;
GM19099
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000717
474 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000778; labVersion=remapped from hg18, Data paired with GM19099_IgG_Control; md5sum=3f69a9437bc065396037128301bf3f6c;
GM19099
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000717
5.9 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1381; controlId=wgEncodeEH000778; labVersion=remapped from hg18, Data paired with GM19099_IgG_Control; md5sum=3b9014bf578f07c99b00c07913eea8de;
GM19099
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000717
1.0 GB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1381; controlId=wgEncodeEH000778; labVersion=remapped from hg18, Data paired with GM19099_IgG_Control; md5sum=5c9b66a1cfbc24b5dc01412e37965e14;
GM19099
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000717
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1370; controlId=wgEncodeEH000778; labVersion=remapped from hg18, Data paired with GM19099_IgG_Control; md5sum=28e72060c2e050d45fb20a39c94c5ec0;
GM19099
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000717
459 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1370; controlId=wgEncodeEH000778; labVersion=remapped from hg18, Data paired with GM19099_IgG_Control; md5sum=50749b94e423f841b756706d3bc15f91;
GM19099
NFKB (sc-372)
TNF-alpha
Peaks
IgG-rab
exp
wgEncodeEH000717
GSM935273
356 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000778; tableName=wgEncodeSydhTfbsGm19099NfkbTnfaIggrabPk; md5sum=a587c0dcf9b76e35b30134e124a6cee1;
GM19099
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000717
GSM935273
352 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=946; controlId=wgEncodeEH000778; labVersion=Data paired with GM19099_IgG_Control; md5sum=e2566ed654191d359f273cf34e55bb73;
GM19099
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000717
GSM935273
356 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=946; controlId=wgEncodeEH000778; labVersion=Data paired with GM19099_IgG_Control; md5sum=949a7645ce37e812a36ed91ae70b7712;
GM19099
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000717
GSM935273
790 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=946; controlId=wgEncodeEH000778; labVersion=Data paired with GM19099_IgG_Control; md5sum=54f938aa6ad085a620fa5bd82de183a6;
GM19099
NFKB (sc-372)
TNF-alpha
Signal
IgG-rab
exp
wgEncodeEH000717
GSM935273
457 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000778; tableName=wgEncodeSydhTfbsGm19099NfkbTnfaIggrabSig; md5sum=a7f19d09913558ccf059717f9a291abd;
GM19099
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000741
5.8 MB
bam.bai
2010-01-14
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000740; labVersion=remapped from hg18, llumina 2.0, low confidence sequences excluded. Data paired with GM19099_IgG_Control.; md5sum=758fd096d168754ae75a79da031f8bc6;
GM19099
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000741
903 MB
bam
2010-01-14
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000740; labVersion=remapped from hg18, llumina 2.0, low confidence sequences excluded. Data paired with GM19099_IgG_Control.; md5sum=0df1bd7a6de3a7ab60db830ce51ee62d;
GM19099
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000741
5.5 MB
bam.bai
2010-01-14
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1381; controlId=wgEncodeEH000740; labVersion=remapped from hg18, llumina 2.0, low confidence sequences excluded. Data paired with GM19099_IgG_Control.; md5sum=832ebbd7918b2b6bb3dfcd554efb818e;
GM19099
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000741
183 MB
bam
2010-01-14
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1381; controlId=wgEncodeEH000740; labVersion=remapped from hg18, llumina 2.0, low confidence sequences excluded. Data paired with GM19099_IgG_Control.; md5sum=c49a66d3d267f713d8c8bc494f864718;
GM19099
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000741
5.5 MB
bam.bai
2010-01-14
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1370; controlId=wgEncodeEH000740; labVersion=remapped from hg18, llumina 2.0, low confidence sequences excluded. Data paired with GM19099_IgG_Control.; md5sum=928f2a35832206c52fcbc6b57b914f4d;
GM19099
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000741
232 MB
bam
2010-01-14
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1370; controlId=wgEncodeEH000740; labVersion=remapped from hg18, llumina 2.0, low confidence sequences excluded. Data paired with GM19099_IgG_Control.; md5sum=7946574ea00b22fe54350128531685fa;
GM19099
POL2 (MMS-126R)
None
Peaks
IgG-mus
exp
wgEncodeEH000741
GSM935323
284 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000740; tableName=wgEncodeSydhTfbsGm19099Pol2IggmusPk; md5sum=b2cce8a80b732b528ea4c82c62a945f0;
GM19099
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000741
GSM935323
153 MB
fastq
2010-01-14
2010-10-13
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1046; controlId=wgEncodeEH000740; labVersion=llumina 2.0, low confidence sequences excluded. Data paired with GM19099_IgG_Control.; md5sum=321ccde87e953eb1b1bfca95b9053b7a;
GM19099
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000741
GSM935323
191 MB
fastq
2010-01-14
2010-10-13
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1046; controlId=wgEncodeEH000740; labVersion=llumina 2.0, low confidence sequences excluded. Data paired with GM19099_IgG_Control.; md5sum=416d1d57b59e5c99f358c73b6aa076ef;
GM19099
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000741
GSM935323
695 MB
fastq
2010-01-14
2010-10-13
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1046; controlId=wgEncodeEH000740; labVersion=llumina 2.0, low confidence sequences excluded. Data paired with GM19099_IgG_Control.; md5sum=0032468f039d0c7b3872e3c6144c8b35;
GM19099
POL2 (MMS-126R)
None
Signal
IgG-mus
exp
wgEncodeEH000741
GSM935323
351 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000740; tableName=wgEncodeSydhTfbsGm19099Pol2IggmusSig; md5sum=6a93b6e6998a175a1c1a1ad7be137c9b;
GM19193
Input
None
Alignments
IgG-mus
input
wgEncodeEH000742
5.6 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1381; controlId=wgEncodeEH000742; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=a52d8161b44cbd36ef6e55387eb61a4f;
GM19193
Input
None
Alignments
IgG-mus
input
wgEncodeEH000742
226 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=1381; controlId=wgEncodeEH000742; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=a76400cf9266a2faff8ee4cbcfe517b4;
GM19193
Input
None
Alignments
IgG-mus
input
wgEncodeEH000742
5.6 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1370; controlId=wgEncodeEH000742; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=fffdc08d57122824a72aedfcec161b21;
GM19193
Input
None
Alignments
IgG-mus
input
wgEncodeEH000742
324 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1370; controlId=wgEncodeEH000742; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=aa52ca6f40839090a2d58cd616ca0c8d;
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000779; tableName=wgEncodeSydhTfbsGm19193InputTnfaIggrabSig; md5sum=bc4cc67bae7bbda2b556cbd7d670900e;
GM19193
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000718
5.6 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000779; labVersion=remapped from hg18, Data paired with GM19193_IgG_Control; md5sum=a430b45a6fe73844277eca5281415987;
GM19193
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000718
235 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1390; controlId=wgEncodeEH000779; labVersion=remapped from hg18, Data paired with GM19193_IgG_Control; md5sum=6327997131aa9541a92747728b9d9c7a;
GM19193
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000718
5.9 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1382; controlId=wgEncodeEH000779; labVersion=remapped from hg18, Data paired with GM19193_IgG_Control; md5sum=6cc1dbc5674fc0cf4793045537348351;
GM19193
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000718
952 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1382; controlId=wgEncodeEH000779; labVersion=remapped from hg18, Data paired with GM19193_IgG_Control; md5sum=fe4b23e6b4d23b2512f768fe8ac2dc1f;
GM19193
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000718
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1370; controlId=wgEncodeEH000779; labVersion=remapped from hg18, Data paired with GM19193_IgG_Control; md5sum=1170351e491ae85615727ed8e46859d8;
GM19193
NFKB (sc-372)
TNF-alpha
Alignments
IgG-rab
exp
wgEncodeEH000718
477 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1370; controlId=wgEncodeEH000779; labVersion=remapped from hg18, Data paired with GM19193_IgG_Control; md5sum=7ef12234c56b82a5f6586eb7ee1369dc;
GM19193
NFKB (sc-372)
TNF-alpha
Peaks
IgG-rab
exp
wgEncodeEH000718
GSM935279
165 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000779; tableName=wgEncodeSydhTfbsGm19193NfkbTnfaIggrabPk; md5sum=86b8d87af4ab5e680d0db0b7ac6ba03b;
GM19193
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000718
GSM935279
182 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=947; controlId=wgEncodeEH000779; labVersion=Data paired with GM19193_IgG_Control; md5sum=d1bf01bbd66417859bd1eb9466f2fb3c;
GM19193
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000718
GSM935279
368 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=947; controlId=wgEncodeEH000779; labVersion=Data paired with GM19193_IgG_Control; md5sum=86cbd89304918bc63a43409003a5ea3c;
GM19193
NFKB (sc-372)
TNF-alpha
Raw data
IgG-rab
exp
wgEncodeEH000718
GSM935279
706 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=947; controlId=wgEncodeEH000779; labVersion=Data paired with GM19193_IgG_Control; md5sum=24a1ac37415fd9234382ae6fba6c22bf;
GM19193
NFKB (sc-372)
TNF-alpha
Signal
IgG-rab
exp
wgEncodeEH000718
GSM935279
467 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000779; tableName=wgEncodeSydhTfbsGm19193NfkbTnfaIggrabSig; md5sum=c6177c4e859337edf383f051ab76d6c3;
GM19193
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000743
5.5 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000742; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; md5sum=575c643f5ad39f3e5cbbf116c83df2a6;
GM19193
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000743
160 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1393; controlId=wgEncodeEH000742; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; md5sum=c864634ad6de520e5f3ffd39de3bedb8;
GM19193
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000743
5.6 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1391; controlId=wgEncodeEH000742; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; md5sum=9d3409dd6dc720014d45f4b6d6004999;
GM19193
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000743
595 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1391; controlId=wgEncodeEH000742; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; md5sum=7177cce2cf52d964c1ce8d11b60483c5;
GM19193
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000743
5.5 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1382; controlId=wgEncodeEH000742; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; md5sum=6f0e137a8688a09f1c8adfe5a8dd7ac9;
GM19193
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000743
712 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1382; controlId=wgEncodeEH000742; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; md5sum=55fced8ec54055c170352fe83a56ab06;
GM19193
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000743
5.5 MB
bam.bai
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1370; controlId=wgEncodeEH000742; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; md5sum=01a150c1ef342c5ca55c68b7bcc4acd5;
GM19193
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000743
174 MB
bam
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1370; controlId=wgEncodeEH000742; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; md5sum=921e637680fe056cdd3b7416377a11fb;
GM19193
POL2 (MMS-126R)
None
Peaks
IgG-mus
exp
wgEncodeEH000743
GSM935325
325 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000742; tableName=wgEncodeSydhTfbsGm19193Pol2IggmusPk; md5sum=174d831bdd0d67f967f64f1439ea1848;
GM19193
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000743
GSM935325
131 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=4; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1048; controlId=wgEncodeEH000742; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; md5sum=ffa6335434a97ea107d41ab2ff1219ae;
GM19193
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000743
GSM935325
142 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1048; controlId=wgEncodeEH000742; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; md5sum=d44e02889f161c26feca1b83003254c9;
GM19193
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000743
GSM935325
485 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1048; controlId=wgEncodeEH000742; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; md5sum=b84ec356aa6154e0f591f7ae11deb512;
GM19193
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000743
GSM935325
634 MB
fastq
2010-01-14
2010-10-14
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1048; controlId=wgEncodeEH000742; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; md5sum=8cb52a75367019b16c8437fbbbffa535;
GM19193
POL2 (MMS-126R)
None
Signal
IgG-mus
exp
wgEncodeEH000743
GSM935325
302 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000742; tableName=wgEncodeSydhTfbsGm19193Pol2IggmusSig; md5sum=4e663f3b35e2be5867bcaf204cf555b0;
H1-hESC
BRCA1 (A300-000A)
None
Alignments
IgG-rab
exp
wgEncodeEH002801
5.8 MB
bam.bai
2011-09-29
2012-06-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=4929; controlId=wgEncodeEH001834; md5sum=35a40cece3a0302b03491b93afc020c2;
H1-hESC
BRCA1 (A300-000A)
None
Alignments
IgG-rab
exp
wgEncodeEH002801
462 MB
bam
2011-09-29
2012-06-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=4929; controlId=wgEncodeEH001834; md5sum=580e1020d289919a85da95ea6664b443;
H1-hESC
BRCA1 (A300-000A)
None
Alignments
IgG-rab
exp
wgEncodeEH002801
5.9 MB
bam.bai
2011-09-29
2012-06-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=4929; controlId=wgEncodeEH001834; md5sum=f9e357bf04f644de92a737ef60d5f43f;
H1-hESC
BRCA1 (A300-000A)
None
Alignments
IgG-rab
exp
wgEncodeEH002801
561 MB
bam
2011-09-29
2012-06-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=4929; controlId=wgEncodeEH001834; md5sum=ca6bc46be7cc3507694bf4b7618fb28f;
H1-hESC
BRCA1 (A300-000A)
None
Peaks
IgG-rab
exp
wgEncodeEH002801
GSM935517
232 KB
narrowPeak
2011-09-29
2012-06-28
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=4929; controlId=wgEncodeEH001834; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsH1hescBrca1IggrabPk; md5sum=dd0e5b6256dc61f593df06cf61c112e0;
H1-hESC
BRCA1 (A300-000A)
None
Raw data
IgG-rab
exp
wgEncodeEH002801
GSM935517
917 MB
fastq.tgz
2011-09-29
2012-06-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=4929; controlId=wgEncodeEH001834; md5sum=4d0a5ec5945c5d047862cad990a078cc;
H1-hESC
BRCA1 (A300-000A)
None
Raw data
IgG-rab
exp
wgEncodeEH002801
GSM935517
1.6 GB
fastq.tgz
2011-09-29
2012-06-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=4929; controlId=wgEncodeEH001834; md5sum=d2918f3f99ee9459a42f89d6b4657369;
H1-hESC
BRCA1 (A300-000A)
None
Signal
IgG-rab
exp
wgEncodeEH002801
GSM935517
387 MB
bigWig
2011-09-29
2012-06-28
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=4929; controlId=wgEncodeEH001834; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsH1hescBrca1IggrabSig; md5sum=e25fb9a30d6644ed840a848c3a39b726;
H1-hESC
BACH1 (sc-14700)
None
Alignments
IgG-rab
exp
wgEncodeEH002842
5.9 MB
bam.bai
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5553; controlId=wgEncodeEH001834; md5sum=71fb274f4251f86e1fc74b2f6507ae1b;
H1-hESC
BACH1 (sc-14700)
None
Alignments
IgG-rab
exp
wgEncodeEH002842
527 MB
bam
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5553; controlId=wgEncodeEH001834; md5sum=d63325c3f57d2719bfb39783492ce1fc;
H1-hESC
BACH1 (sc-14700)
None
Alignments
IgG-rab
exp
wgEncodeEH002842
5.9 MB
bam.bai
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5553; controlId=wgEncodeEH001834; md5sum=0776b67a45364d6e0b9d225ab63f7a0a;
H1-hESC
BACH1 (sc-14700)
None
Alignments
IgG-rab
exp
wgEncodeEH002842
561 MB
bam
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5553; controlId=wgEncodeEH001834; md5sum=9b32d5ad055b1cf6280c28ce405c3a34;
H1-hESC
BACH1 (sc-14700)
None
Peaks
IgG-rab
exp
wgEncodeEH002842
GSM935580
756 KB
narrowPeak
2012-02-27
2012-11-27
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5553; controlId=wgEncodeEH001834; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsH1hescBach1sc14700IggrabPk; md5sum=f331ce00876bfaaa67859f60c78dd416;
H1-hESC
BACH1 (sc-14700)
None
Raw data
IgG-rab
exp
wgEncodeEH002842
GSM935580
1.1 GB
fastq.tgz
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5553; controlId=wgEncodeEH001834; md5sum=3585d5d6252ec5aa1c6f5e9dfebd2efe;
H1-hESC
BACH1 (sc-14700)
None
Raw data
IgG-rab
exp
wgEncodeEH002842
GSM935580
1.2 GB
fastq.tgz
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5553; controlId=wgEncodeEH001834; md5sum=0bd0c3f34c911f2d6f01debc4fa7cd27;
H1-hESC
BACH1 (sc-14700)
None
Signal
IgG-rab
exp
wgEncodeEH002842
GSM935580
405 MB
bigWig
2012-02-27
2012-11-27
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5553; controlId=wgEncodeEH001834; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsH1hescBach1sc14700IggrabSig; md5sum=ea63a3d67e7622de53ccfa54f6c5c948;
H1-hESC
CEBPB (sc-150)
None
Alignments
IgG-rab
exp
wgEncodeEH002825
5.9 MB
bam.bai
2012-02-04
2012-11-03
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5530; controlId=wgEncodeEH001834; md5sum=edd2b9ce9fbca3d867918e7c928e0d08;
H1-hESC
CEBPB (sc-150)
None
Alignments
IgG-rab
exp
wgEncodeEH002825
488 MB
bam
2012-02-04
2012-11-03
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5530; controlId=wgEncodeEH001834; md5sum=16e944096e2697e09693804d705f4847;
H1-hESC
CEBPB (sc-150)
None
Alignments
IgG-rab
exp
wgEncodeEH002825
5.9 MB
bam.bai
2012-02-04
2012-11-03
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5530; controlId=wgEncodeEH001834; md5sum=a8b25be91d14d82fd7d03a8ccd50512e;
H1-hESC
CEBPB (sc-150)
None
Alignments
IgG-rab
exp
wgEncodeEH002825
527 MB
bam
2012-02-04
2012-11-03
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5530; controlId=wgEncodeEH001834; md5sum=0ef1595f58385fb75e70275a5fcace55;
H1-hESC
CEBPB (sc-150)
None
Peaks
IgG-rab
exp
wgEncodeEH002825
GSM935295
1.1 MB
narrowPeak
2012-02-04
2012-11-03
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5530; controlId=wgEncodeEH001834; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsH1hescCebpbIggrabPk; md5sum=ed62557b1c46f8ba0b3dfa7cb9b4c7a7;
H1-hESC
CEBPB (sc-150)
None
Raw data
IgG-rab
exp
wgEncodeEH002825
GSM935295
859 MB
fastq.tgz
2012-02-04
2012-11-03
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5530; controlId=wgEncodeEH001834; md5sum=f0b8c9317fbb2b982debc79959caee54;
H1-hESC
CEBPB (sc-150)
None
Raw data
IgG-rab
exp
wgEncodeEH002825
GSM935295
915 MB
fastq.tgz
2012-02-04
2012-11-03
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5530; controlId=wgEncodeEH001834; md5sum=ebccb517a86cd952f3784210c71ffa12;
H1-hESC
CEBPB (sc-150)
None
Signal
IgG-rab
exp
wgEncodeEH002825
GSM935295
374 MB
bigWig
2012-02-04
2012-11-03
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5530; controlId=wgEncodeEH001834; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsH1hescCebpbIggrabSig; md5sum=6137b2ff0b5bd897627f4e276b963e0b;
H1-hESC
CHD1 (A301-218A)
None
Alignments
IgG-rab
exp
wgEncodeEH002826
5.9 MB
bam.bai
2012-02-04
2012-11-03
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5552; controlId=wgEncodeEH001834; md5sum=7e75eb556932210c800ad545e15a9bad;
H1-hESC
CHD1 (A301-218A)
None
Alignments
IgG-rab
exp
wgEncodeEH002826
489 MB
bam
2012-02-04
2012-11-03
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5552; controlId=wgEncodeEH001834; md5sum=61774e13d1eea0218a760830d724b66b;
H1-hESC
CHD1 (A301-218A)
None
Alignments
IgG-rab
exp
wgEncodeEH002826
6.0 MB
bam.bai
2012-02-04
2012-11-03
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5552; controlId=wgEncodeEH001834; md5sum=a94fe4a0af6df63963522a0441396f9e;
H1-hESC
CHD1 (A301-218A)
None
Alignments
IgG-rab
exp
wgEncodeEH002826
603 MB
bam
2012-02-04
2012-11-03
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5552; controlId=wgEncodeEH001834; md5sum=0c6f62506e4f5f2c15272087efdff78b;
H1-hESC
CHD1 (A301-218A)
None
Peaks
IgG-rab
exp
wgEncodeEH002826
GSM935296
360 KB
narrowPeak
2012-02-04
2012-11-03
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5552; controlId=wgEncodeEH001834; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsH1hescChd1a301218aIggrabPk; md5sum=1a7c3d3d37ec307d31ef4baffdda87f3;
H1-hESC
CHD1 (A301-218A)
None
Raw data
IgG-rab
exp
wgEncodeEH002826
GSM935296
880 MB
fastq.tgz
2012-02-04
2012-11-03
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5552; controlId=wgEncodeEH001834; md5sum=799727d4defc64d9b8abec686639e46f;
H1-hESC
CHD1 (A301-218A)
None
Raw data
IgG-rab
exp
wgEncodeEH002826
GSM935296
1.1 GB
fastq.tgz
2012-02-04
2012-11-03
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5552; controlId=wgEncodeEH001834; md5sum=f5c917392bedaddcf8047446c720d1d5;
H1-hESC
CHD1 (A301-218A)
None
Signal
IgG-rab
exp
wgEncodeEH002826
GSM935296
389 MB
bigWig
2012-02-04
2012-11-03
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5552; controlId=wgEncodeEH001834; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsH1hescChd1a301218aIggrabSig; md5sum=cb0cf9d4e86827c8e02633eb0176ca83;
H1-hESC
CHD2 (ab68301)
None
Alignments
IgG-rab
exp
wgEncodeEH002827
5.9 MB
bam.bai
2012-02-04
2012-11-03
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5531; controlId=wgEncodeEH001834; md5sum=29e9f05490350b8b3b8afab6278f0b18;
H1-hESC
CHD2 (ab68301)
None
Alignments
IgG-rab
exp
wgEncodeEH002827
511 MB
bam
2012-02-04
2012-11-03
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5531; controlId=wgEncodeEH001834; md5sum=c350f0a28752e8585517d9ef84094fe4;
H1-hESC
CHD2 (ab68301)
None
Alignments
IgG-rab
exp
wgEncodeEH002827
5.9 MB
bam.bai
2012-02-04
2012-11-03
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5531; controlId=wgEncodeEH001834; md5sum=37e9110b9879c878dab05ae25ab43a06;
H1-hESC
CHD2 (ab68301)
None
Alignments
IgG-rab
exp
wgEncodeEH002827
569 MB
bam
2012-02-04
2012-11-03
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5531; controlId=wgEncodeEH001834; md5sum=5f5618ceee1fe08687d9f1c31a849d66;
H1-hESC
CHD2 (ab68301)
None
Peaks
IgG-rab
exp
wgEncodeEH002827
GSM935297
635 KB
narrowPeak
2012-02-04
2012-11-03
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5531; controlId=wgEncodeEH001834; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsH1hescChd2IggrabPk; md5sum=f0607cd3374078033d7d884b8c17bde2;
H1-hESC
CHD2 (ab68301)
None
Raw data
IgG-rab
exp
wgEncodeEH002827
GSM935297
984 MB
fastq.tgz
2012-02-04
2012-11-03
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5531; controlId=wgEncodeEH001834; md5sum=c6c5d178c3a706e60b2f39c41a1097ba;
H1-hESC
CHD2 (ab68301)
None
Raw data
IgG-rab
exp
wgEncodeEH002827
GSM935297
1.1 GB
fastq.tgz
2012-02-04
2012-11-03
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5531; controlId=wgEncodeEH001834; md5sum=967b45e4abc689159cb5c3f4e18f6633;
H1-hESC
CHD2 (ab68301)
None
Signal
IgG-rab
exp
wgEncodeEH002827
GSM935297
398 MB
bigWig
2012-02-04
2012-11-03
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5531; controlId=wgEncodeEH001834; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsH1hescChd2IggrabSig; md5sum=ca8dcdf709bb79cb141043efadfcd63d;
H1-hESC
CtBP2 (612044)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001767
5.6 MB
bam.bai
2010-10-20
2011-07-20
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2544; controlId=wgEncodeEH001751; md5sum=7cc3103ceec87466d97ec87a8d559f2c;
H1-hESC
CtBP2 (612044)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001767
164 MB
bam
2010-10-20
2011-07-20
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2544; controlId=wgEncodeEH001751; md5sum=37def9b9dc674e87d12cf58ed66ec335;
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=4922; controlId=wgEncodeEH001834; md5sum=e6f66bf189164b64b70ced592b5b6e6b;
H1-hESC
c-Myc (sc-764)
None
Alignments
IgG-rab
exp
wgEncodeEH002795
611 MB
bam
2011-09-28
2012-06-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=4922; controlId=wgEncodeEH001834; md5sum=63601d01d8436baef183e628dbeef701;
H1-hESC
c-Myc (sc-764)
None
Alignments
IgG-rab
exp
wgEncodeEH002795
5.8 MB
bam.bai
2011-09-28
2012-06-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=4922; controlId=wgEncodeEH001834; md5sum=72b959cfbec992ef403518a36f96a644;
H1-hESC
c-Myc (sc-764)
None
Alignments
IgG-rab
exp
wgEncodeEH002795
454 MB
bam
2011-09-28
2012-06-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=4922; controlId=wgEncodeEH001834; md5sum=1f749c207bf712769f793124a7be5b19;
H1-hESC
c-Myc (sc-764)
None
Peaks
IgG-rab
exp
wgEncodeEH002795
GSM935509
631 KB
narrowPeak
2011-09-28
2012-06-28
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=4922; controlId=wgEncodeEH001834; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsH1hescCmycIggrabPk; md5sum=0edf98fcc1d7f037824293a197b64edf;
H1-hESC
c-Myc (sc-764)
None
Raw data
IgG-rab
exp
wgEncodeEH002795
GSM935509
1.1 GB
fastq.tgz
2011-09-28
2012-06-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=4922; controlId=wgEncodeEH001834; md5sum=5dc48a2d14df2fef100049a5fc8e7da3;
H1-hESC
c-Myc (sc-764)
None
Raw data
IgG-rab
exp
wgEncodeEH002795
GSM935509
1.2 GB
fastq.tgz
2011-09-28
2012-06-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=4922; controlId=wgEncodeEH001834; md5sum=b056c1c072c083efb40d746e3510e399;
H1-hESC
c-Myc (sc-764)
None
Signal
IgG-rab
exp
wgEncodeEH002795
GSM935509
382 MB
bigWig
2011-09-28
2012-06-28
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=4922; controlId=wgEncodeEH001834; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsH1hescCmycIggrabSig; md5sum=cf51b7ed44e4d39aefade4c0ad5f0869;
HCT-116
Input
None
Alignments
UCDavis Input Control
input
wgEncodeEH000627
5.8 MB
bam.bai
2009-02-25
2009-11-25
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1358; controlId=wgEncodeEH000627; labVersion=remapped from hg18; md5sum=f7a4c4d2972d3358474d79cdad77d7e3;
HCT-116
Input
None
Alignments
UCDavis Input Control
input
wgEncodeEH000627
470 MB
bam
2009-02-25
2009-11-25
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1358; controlId=wgEncodeEH000627; labVersion=remapped from hg18; md5sum=d78ebf6da51ab6e79621080884cb66f1;
HCT-116
Input
None
Raw data
UCDavis Input Control
input
wgEncodeEH000627
GSM817344
379 MB
fastq
2009-02-25
2009-11-25
lab=USC; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; subId=224; controlId=wgEncodeEH000627; md5sum=b4a225faf3b4b4d621243e137385aec2;
HCT-116
Input
None
Signal
UCDavis Input Control
input
wgEncodeEH000627
GSM817344
283 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000627; tableName=wgEncodeSydhTfbsHct116InputUcdSig; md5sum=4fac8cf5d28494dbb2a5e910b93b40a9;
HCT-116
POL2 (MMS-126R)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000651
5.6 MB
bam.bai
2009-05-15
2010-02-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000627; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=082cba713cd4a9a7459b0624c4547e7c;
HCT-116
POL2 (MMS-126R)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000651
292 MB
bam
2009-05-15
2010-02-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000627; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=9b297b66d778d6a7e62e9ae418c220ff;
HCT-116
POL2 (MMS-126R)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000651
5.7 MB
bam.bai
2009-05-15
2010-02-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1358; controlId=wgEncodeEH000627; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=dabe69d2ca5d4424bb1d7f60a12b4f72;
HCT-116
POL2 (MMS-126R)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000651
442 MB
bam
2009-05-15
2010-02-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1358; controlId=wgEncodeEH000627; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=24929b87a8ec879923f551482156c0e6;
HCT-116
POL2 (MMS-126R)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000651
GSM935426
174 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000627; tableName=wgEncodeSydhTfbsHct116Pol2UcdPk; md5sum=d0d1bfbeaa29236b32a15aefbcd2e2a3;
HCT-116
POL2 (MMS-126R)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000651
GSM935426
252 MB
fastq
2009-05-15
2010-02-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=333; controlId=wgEncodeEH000627; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=1efeba5cf210f9f63afea256188a855d;
HCT-116
POL2 (MMS-126R)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000651
GSM935426
356 MB
fastq
2009-05-15
2010-02-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=333; controlId=wgEncodeEH000627; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=8819c477c1800c7dd2568cabec25c905;
HCT-116
POL2 (MMS-126R)
None
Signal
UCDavis Input Control
exp
wgEncodeEH000651
GSM935426
299 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000627; tableName=wgEncodeSydhTfbsHct116Pol2UcdSig; md5sum=bd50e7ff2dd4cacd879d997cd22f7529;
HCT-116
TCF7L2 (2569)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000629
GSM782123
5.6 MB
bam.bai
2009-02-25
2009-11-25
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000627; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein G magnetic beads, PeakSeq 1.0 (fdr 0.001); md5sum=5b2c7caa1fc6aa07dbb0d3d0be30a5b4;
HCT-116
TCF7L2 (2569)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000629
GSM782123
5.7 MB
bam.bai
2009-02-25
2009-11-25
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1358; controlId=wgEncodeEH000627; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein G magnetic beads, PeakSeq 1.0 (fdr 0.001); md5sum=10fde6e46e01dee903ef349eb7beee10;
HCT-116
TCF7L2 (2569)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000629
GSM782123
229 MB
bam
2009-02-25
2009-11-25
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000627; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein G magnetic beads, PeakSeq 1.0 (fdr 0.001); md5sum=a3de170a7849edf9218e19204f8e46de;
HCT-116
TCF7L2 (2569)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000629
GSM782123
411 MB
bam
2009-02-25
2009-11-25
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1358; controlId=wgEncodeEH000627; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein G magnetic beads, PeakSeq 1.0 (fdr 0.001); md5sum=8160c3d74ba505aca5af720f71867644;
HCT-116
TCF7L2 (2569)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000629
GSM782123
332 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000627; tableName=wgEncodeSydhTfbsHct116Tcf7l2UcdPk; md5sum=2816793e812a1492fa1f2d94fbdf50d1;
HCT-116
TCF7L2 (2569)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000629
GSM782123
183 MB
fastq
2009-02-25
2009-11-25
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; subId=225; controlId=wgEncodeEH000627; labVersion=Fragmented using Bioruptor, precipitated with protein G magnetic beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=2f66ec99b251c1e844c786cfc8b85d5a;
HCT-116
TCF7L2 (2569)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000629
GSM782123
344 MB
fastq
2009-02-25
2009-11-25
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; subId=225; controlId=wgEncodeEH000627; labVersion=Fragmented using Bioruptor, precipitated with protein G magnetic beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=a2c2f1f6b80336dc6c33b899ba6c9495;
HCT-116
TCF7L2 (2569)
None
Signal
UCDavis Input Control
exp
wgEncodeEH000629
GSM782123
291 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000627; tableName=wgEncodeSydhTfbsHct116Tcf7l2UcdSig; md5sum=915bbf8c8fad3e8fde372afe3f5c9ddc;
HEK293
ELK4 (sc-13030)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001773
6.1 MB
bam.bai
2011-01-13
2011-05-31
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3248; controlId=wgEncodeEH001777; md5sum=bbdc2fafc2afc673299a06f05f74aec7;
HEK293
ELK4 (sc-13030)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001773
801 MB
bam
2011-01-13
2011-05-31
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3248; controlId=wgEncodeEH001777; md5sum=af04df68d1a39212cadbae93468c4911;
HEK293
ELK4 (sc-13030)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001773
5.8 MB
bam.bai
2011-01-13
2011-05-31
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3248; controlId=wgEncodeEH001777; md5sum=54e3b7345278fa7bf5411e3e724b171b;
HEK293
ELK4 (sc-13030)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001773
374 MB
bam
2011-01-13
2011-05-31
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3248; controlId=wgEncodeEH001777; md5sum=c1dae883477e6bb5a074937aace75490;
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000631; tableName=wgEncodeSydhTfbsHek293InputStdSig; md5sum=f6707b359f57246223d332641a2dcf6d;
HEK293
KAP1 (ab10483)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001779
6.2 MB
bam.bai
2011-01-18
2011-05-31
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3316; controlId=wgEncodeEH001777; md5sum=e2d7a74f95cc3723f07089a8bb2cf85f;
HEK293
KAP1 (ab10483)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001779
960 MB
bam
2011-01-18
2011-05-31
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3316; controlId=wgEncodeEH001777; md5sum=00283d2677e1cc3156acab1b25715866;
HEK293
KAP1 (ab10483)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001779
6.1 MB
bam.bai
2011-01-18
2011-05-31
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3316; controlId=wgEncodeEH001777; md5sum=30875f8b9706f67266b28b7ecf57ceed;
HEK293
KAP1 (ab10483)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001779
825 MB
bam
2011-01-18
2011-05-31
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3316; controlId=wgEncodeEH001777; md5sum=3ff2758618a3051c7f44804bc9576f53;
HEK293
KAP1 (ab10483)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH001779
GSM935592
815 KB
narrowPeak
2011-01-18
2011-05-31
lab=USC; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3316; controlId=wgEncodeEH001777; labVersion=PeakSeq1.0. KAP1 colocalizes with H3K9me3 marks and peak analysis should be performed using programs modified for spreading histone marks such as H3K9me3 and H3K27me3.; tableName=wgEncodeSydhTfbsHek293Kap1UcdPk; md5sum=cbcef2645811cf259f9bcf99be4e9c41;
HEK293
KAP1 (ab10483)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH001779
GSM935592
2.2 GB
fastq
2011-01-18
2011-05-31
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3316; controlId=wgEncodeEH001777; md5sum=02cb1977de3da448f330377c4f367554;
HEK293
KAP1 (ab10483)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH001779
GSM935592
2.8 GB
fastq
2011-01-18
2011-05-31
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3316; controlId=wgEncodeEH001777; md5sum=9003064b4528bfe51dee3d5d4119e4ed;
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4341; controlId=wgEncodeEH001777; labVersion=Method of Chromatin Fragmentation: Sonciation. Method of Immunoprecipitation: Protein G Magnetic Beads.; md5sum=abc72eae7543bde4a7b418549f8645df;
HEK293
TCF7L2 (2569)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH002022
GSM782124
1.2 GB
fastq.tgz
2011-06-22
2012-03-22
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4341; controlId=wgEncodeEH001777; labVersion=Method of Chromatin Fragmentation: Sonication. Method of Immunoprecipitation: Protein G Magnetic Beads.; md5sum=9de98a9ad57a5ff9f050dcef6bc34c67;
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1385; controlId=wgEncodeEH000780; labVersion=remapped from hg18; md5sum=b0ebee9163ea9eb88c050021aca5b5f4;
HUVEC
c-Jun (sc-1694)
None
Alignments
Standard Control
exp
wgEncodeEH000719
1.1 GB
bam
2010-01-12
2010-10-11
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1385; controlId=wgEncodeEH000780; labVersion=remapped from hg18; md5sum=5e3a7ddf32770e7b28c4959c99e30604;
HUVEC
c-Jun (sc-1694)
None
Alignments
Standard Control
exp
wgEncodeEH000719
5.8 MB
bam.bai
2010-01-12
2010-10-11
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1373; controlId=wgEncodeEH000780; labVersion=remapped from hg18; md5sum=f557bf607b563f7d48e8697f3268b59d;
HUVEC
c-Jun (sc-1694)
None
Alignments
Standard Control
exp
wgEncodeEH000719
774 MB
bam
2010-01-12
2010-10-11
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1373; controlId=wgEncodeEH000780; labVersion=remapped from hg18; md5sum=121f73f564048bc655996162a60362ca;
HUVEC
c-Jun (sc-1694)
None
Peaks
Standard Control
exp
wgEncodeEH000719
GSM935278
360 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000780; tableName=wgEncodeSydhTfbsHuvecCjunStdPk; md5sum=ae6fe5c2163b74d8dfaea169e1a4faaf;
HUVEC
c-Jun (sc-1694)
None
Raw data
Standard Control
exp
wgEncodeEH000719
GSM935278
607 MB
fastq
2010-01-12
2010-10-11
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=995; controlId=wgEncodeEH000780; md5sum=c39f4d76e27f3c94eb4b92c1fcc304ce;
HUVEC
c-Jun (sc-1694)
None
Raw data
Standard Control
exp
wgEncodeEH000719
GSM935278
919 MB
fastq
2010-01-12
2010-10-11
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; subId=995; controlId=wgEncodeEH000780; md5sum=0f573d5b31f798f033979c3986cd4ac7;
HUVEC
c-Jun (sc-1694)
None
Signal
Standard Control
exp
wgEncodeEH000719
GSM935278
409 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000780; tableName=wgEncodeSydhTfbsHuvecCjunStdSig; md5sum=2dbecf080c060b5d32689a7740846aab;
HeLa-S3
AP-2alpha (sc-8975)
None
Alignments
Standard Control
exp
wgEncodeEH000685
5.7 MB
bam.bai
2009-09-24
2010-06-23
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=f56284fef1f068321bfdc4ced90659eb;
HeLa-S3
AP-2alpha (sc-8975)
None
Alignments
Standard Control
exp
wgEncodeEH000685
1017 MB
bam
2009-09-24
2010-06-23
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=0fa0a4cd76db3d2ab168ed9419b9effd;
HeLa-S3
AP-2alpha (sc-8975)
None
Alignments
Standard Control
exp
wgEncodeEH000685
5.6 MB
bam.bai
2009-09-24
2010-06-23
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1358; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=40820edcee98f3fe2acdd975078c10ff;
HeLa-S3
AP-2alpha (sc-8975)
None
Alignments
Standard Control
exp
wgEncodeEH000685
521 MB
bam
2009-09-24
2010-06-23
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1358; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=246ee9f5cd32783440487182f70438ea;
HeLa-S3
AP-2alpha (sc-8975)
None
Peaks
Standard Control
exp
wgEncodeEH000685
GSM935367
183 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3Ap2alphaStdPk; md5sum=3f15cfc74e716f82f700dceda9285461;
HeLa-S3
AP-2alpha (sc-8975)
None
Raw data
Standard Control
exp
wgEncodeEH000685
GSM935367
411 MB
fastq
2009-09-24
2010-06-23
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=536; controlId=wgEncodeEH000612; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=1bab468ade8700943299ff150e714c61;
HeLa-S3
AP-2alpha (sc-8975)
None
Raw data
Standard Control
exp
wgEncodeEH000685
GSM935367
904 MB
fastq
2009-09-24
2010-06-23
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=536; controlId=wgEncodeEH000612; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=db1efeefd5d4e41cd6a669e102d6835e;
HeLa-S3
AP-2alpha (sc-8975)
None
Signal
Standard Control
exp
wgEncodeEH000685
GSM935367
267 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3Ap2alphaStdSig; md5sum=40017a5862921b14d9d0a8f2372a9f43;
HeLa-S3
AP-2gamma (sc-8977)
None
Alignments
Standard Control
exp
wgEncodeEH000686
5.7 MB
bam.bai
2009-09-24
2010-06-23
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=18ff5f05455198bc21e007460a00ad13;
HeLa-S3
AP-2gamma (sc-8977)
None
Alignments
Standard Control
exp
wgEncodeEH000686
805 MB
bam
2009-09-24
2010-06-23
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=e21a1ab01a1734e4c1740785ea54271a;
HeLa-S3
AP-2gamma (sc-8977)
None
Alignments
Standard Control
exp
wgEncodeEH000686
5.8 MB
bam.bai
2009-09-24
2010-06-23
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=b1cf8740f3e55ebc1149532aba5fc215;
HeLa-S3
AP-2gamma (sc-8977)
None
Alignments
Standard Control
exp
wgEncodeEH000686
1010 MB
bam
2009-09-24
2010-06-23
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=286301f4fa9682d1177f27962becf953;
HeLa-S3
AP-2gamma (sc-8977)
None
Peaks
Standard Control
exp
wgEncodeEH000686
GSM935370
247 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3Ap2gammaStdPk; md5sum=a2f16645e50ed5419527442218f3c1f6;
HeLa-S3
AP-2gamma (sc-8977)
None
Raw data
Standard Control
exp
wgEncodeEH000686
GSM935370
674 MB
fastq
2009-09-24
2010-06-23
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=537; controlId=wgEncodeEH000612; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=a6b7813dc5cd1828e1e9251852efd807;
HeLa-S3
AP-2gamma (sc-8977)
None
Raw data
Standard Control
exp
wgEncodeEH000686
GSM935370
825 MB
fastq
2009-09-24
2010-06-23
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=537; controlId=wgEncodeEH000612; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=84da1f6a4b3efd56aaa199f7e4779a67;
HeLa-S3
AP-2gamma (sc-8977)
None
Signal
Standard Control
exp
wgEncodeEH000686
GSM935370
321 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3Ap2gammaStdSig; md5sum=efdda1606839995f8a0e7f5d717175e9;
HeLa-S3
BAF155 (sc-10756)
None
Alignments
IgG-mus
exp
wgEncodeEH000720
5.8 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1391; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=a3794c2ed78bd1a2c71f3ac6a2245111;
HeLa-S3
BAF155 (sc-10756)
None
Alignments
IgG-mus
exp
wgEncodeEH000720
719 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1391; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=e65a62f2bb472802742f51be4e99c07a;
HeLa-S3
BAF155 (sc-10756)
None
Alignments
IgG-mus
exp
wgEncodeEH000720
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1382; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=eba458a1e6a76d6ed77246342579d28f;
HeLa-S3
BAF155 (sc-10756)
None
Alignments
IgG-mus
exp
wgEncodeEH000720
617 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1382; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=663e81060e0345715bdfc9468245bf5a;
HeLa-S3
BAF155 (sc-10756)
None
Alignments
IgG-mus
exp
wgEncodeEH000720
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1370; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=04fa2837d87ea8e9ea11cf3f9f886851;
HeLa-S3
BAF155 (sc-10756)
None
Alignments
IgG-mus
exp
wgEncodeEH000720
646 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1370; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=a9c450132aa47e66f949c537afe2d57e;
HeLa-S3
BAF155 (sc-10756)
None
Peaks
IgG-mus
exp
wgEncodeEH000720
GSM935637
134 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000633; tableName=wgEncodeSydhTfbsHelas3Baf155IggmusPk; md5sum=9d9abd6a6f0d763c85e6b1982fb70cac;
HeLa-S3
BAF155 (sc-10756)
None
Raw data
IgG-mus
exp
wgEncodeEH000720
GSM935637
458 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=888; controlId=wgEncodeEH000633; labVersion=Data paired with IgG_Control.; md5sum=d00277862b668817467b215cafbe1653;
HeLa-S3
BAF155 (sc-10756)
None
Raw data
IgG-mus
exp
wgEncodeEH000720
GSM935637
473 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=888; controlId=wgEncodeEH000633; labVersion=Data paired with IgG_Control.; md5sum=c7e71b45eafd85a35deb043db35f5051;
HeLa-S3
BAF155 (sc-10756)
None
Raw data
IgG-mus
exp
wgEncodeEH000720
GSM935637
538 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=888; controlId=wgEncodeEH000633; labVersion=Data paired with IgG_Control.; md5sum=9853a52c4e6ec2a8ce36b8c20859b943;
HeLa-S3
BAF155 (sc-10756)
None
Signal
IgG-mus
exp
wgEncodeEH000720
GSM935637
445 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000633; tableName=wgEncodeSydhTfbsHelas3Baf155IggmusSig; md5sum=ca2a24c55b524e57bb8678d5d10fbd4e;
HeLa-S3
BAF170 (sc-10757)
None
Alignments
IgG-mus
exp
wgEncodeEH000721
5.8 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1391; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=03ca17e7b1acb0be5f5221b153a67ca9;
HeLa-S3
BAF170 (sc-10757)
None
Alignments
IgG-mus
exp
wgEncodeEH000721
737 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1391; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=512944f8481e404a752ce1b48df4dc23;
HeLa-S3
BAF170 (sc-10757)
None
Alignments
IgG-mus
exp
wgEncodeEH000721
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1382; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=0e9241b4c73aac7874bc6b0596a5d6a0;
HeLa-S3
BAF170 (sc-10757)
None
Alignments
IgG-mus
exp
wgEncodeEH000721
694 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1382; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=3b09d89488b0c642e35cd74f6e048fc3;
HeLa-S3
BAF170 (sc-10757)
None
Alignments
IgG-mus
exp
wgEncodeEH000721
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1371; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=35a847254888f81d28a57a86cd0a8f07;
HeLa-S3
BAF170 (sc-10757)
None
Alignments
IgG-mus
exp
wgEncodeEH000721
700 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1371; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=f0ec8fed089b73bbd2ec5a1c66d2c333;
HeLa-S3
BAF170 (sc-10757)
None
Peaks
IgG-mus
exp
wgEncodeEH000721
GSM935638
33 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000633; tableName=wgEncodeSydhTfbsHelas3Baf170IggmusPk; md5sum=edf654888f48670a4dffd3d1216cc99b;
HeLa-S3
BAF170 (sc-10757)
None
Raw data
IgG-mus
exp
wgEncodeEH000721
GSM935638
524 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=890; controlId=wgEncodeEH000633; labVersion=Data paired with IgG_Control.; md5sum=16ec11174257b5414b5c1b12175a6153;
HeLa-S3
BAF170 (sc-10757)
None
Raw data
IgG-mus
exp
wgEncodeEH000721
GSM935638
527 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=890; controlId=wgEncodeEH000633; labVersion=Data paired with IgG_Control.; md5sum=b9a4b1acf4cdf307fc308ab09e175189;
HeLa-S3
BAF170 (sc-10757)
None
Raw data
IgG-mus
exp
wgEncodeEH000721
GSM935638
556 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=890; controlId=wgEncodeEH000633; labVersion=Data paired with IgG_Control.; md5sum=77ac5efe93b9597cd2d5fd020de3ee8e;
HeLa-S3
BAF170 (sc-10757)
None
Signal
IgG-mus
exp
wgEncodeEH000721
GSM935638
454 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3053; controlId=wgEncodeEH000633; tableName=wgEncodeSydhTfbsHelas3Baf170IggmusSig; md5sum=3fadc8e46c958852b25f411d3f819c11;
HeLa-S3
BDP1 (2663)
None
Alignments
Standard Control
exp
wgEncodeEH000763
6.0 MB
bam.bai
2010-01-16
2010-10-15
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1341; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=d682f315d4cf0f569591fddf704b5bb2;
HeLa-S3
BDP1 (2663)
None
Alignments
Standard Control
exp
wgEncodeEH000763
1.2 GB
bam
2010-01-16
2010-10-15
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1341; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=677e5de1d07f62fb29e97c2b4f96b9c4;
HeLa-S3
BDP1 (2663)
None
Alignments
Standard Control
exp
wgEncodeEH000763
5.9 MB
bam.bai
2010-01-16
2010-10-15
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1340; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=c86982668dd3fc78ccf0a398b6c3f039;
HeLa-S3
BDP1 (2663)
None
Alignments
Standard Control
exp
wgEncodeEH000763
1.1 GB
bam
2010-01-16
2010-10-15
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1340; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded; md5sum=14ead4631bd73df717b3bdca7aca4879;
HeLa-S3
BDP1 (2663)
None
Peaks
Standard Control
exp
wgEncodeEH000763
GSM935486
13 KB
narrowPeak
2011-06-03
2012-03-03
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3Bdp1StdPk; md5sum=da8625f81a7cbf84ad37a25c9a2d2163;
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5462; controlId=wgEncodeEH000744; md5sum=f2d388e5009db0766ffb47597a70e679;
HeLa-S3
RCOR1/COREST (sc30189)
None
Alignments
IgG-rab
exp
wgEncodeEH002844
385 MB
bam
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5462; controlId=wgEncodeEH000744; md5sum=e33e572aa9d14c4e2234404ab1c6f505;
HeLa-S3
RCOR1/COREST (sc30189)
None
Alignments
IgG-rab
exp
wgEncodeEH002844
5.9 MB
bam.bai
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5462; controlId=wgEncodeEH000744; md5sum=758a14c52b90ddb815da54d1aeee6b8e;
HeLa-S3
RCOR1/COREST (sc30189)
None
Alignments
IgG-rab
exp
wgEncodeEH002844
612 MB
bam
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5462; controlId=wgEncodeEH000744; md5sum=ab2617f6907f3b322cb9b4e152c5a122;
HeLa-S3
RCOR1/COREST (sc30189)
None
Peaks
IgG-rab
exp
wgEncodeEH002844
GSM935578
964 KB
narrowPeak
2012-02-27
2012-11-27
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5462; controlId=wgEncodeEH000744; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsHelas3Corestsc30189IggrabPk; md5sum=5068b923103fb32b944cd2ab558dc206;
HeLa-S3
RCOR1/COREST (sc30189)
None
Raw data
IgG-rab
exp
wgEncodeEH002844
GSM935578
776 MB
fastq.tgz
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5462; controlId=wgEncodeEH000744; md5sum=be0ece485cd6f704a277696824fcbf47;
HeLa-S3
RCOR1/COREST (sc30189)
None
Raw data
IgG-rab
exp
wgEncodeEH002844
GSM935578
1.2 GB
fastq.tgz
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5462; controlId=wgEncodeEH000744; md5sum=0cec7e601cd387cea0caad0341fc23ef;
HeLa-S3
RCOR1/COREST (sc30189)
None
Signal
IgG-rab
exp
wgEncodeEH002844
GSM935578
383 MB
bigWig
2012-02-27
2012-11-27
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5462; controlId=wgEncodeEH000744; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsHelas3Corestsc30189IggrabSig; md5sum=fb1c8c84bef51504cb7e26f44a0e069d;
HeLa-S3
E2F1 (05-379)
None
Alignments
Standard Control
exp
wgEncodeEH000699
5.9 MB
bam.bai
2010-01-08
2010-10-08
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000612; labVersion=remapped from hg18, HeLa cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to E2F1, PeakSeq 1.0 (fdr 0.001); md5sum=a55a983fe564fe93b688e1ce57af90ec;
HeLa-S3
E2F1 (05-379)
None
Alignments
Standard Control
exp
wgEncodeEH000699
918 MB
bam
2010-01-08
2010-10-08
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000612; labVersion=remapped from hg18, HeLa cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to E2F1, PeakSeq 1.0 (fdr 0.001); md5sum=49370012c559bd874874432c0bf860ea;
HeLa-S3
E2F1 (05-379)
None
Alignments
Standard Control
exp
wgEncodeEH000699
5.9 MB
bam.bai
2010-01-08
2010-10-08
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000612; labVersion=remapped from hg18, HeLa cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to E2F1, PeakSeq 1.0 (fdr 0.001); md5sum=5d94841b921226f3b8e12766b449c62f;
HeLa-S3
E2F1 (05-379)
None
Alignments
Standard Control
exp
wgEncodeEH000699
1.0 GB
bam
2010-01-08
2010-10-08
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000612; labVersion=remapped from hg18, HeLa cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to E2F1, PeakSeq 1.0 (fdr 0.001); md5sum=02d31daf49445e206e95ca185d6efef2;
HeLa-S3
E2F1 (05-379)
None
Peaks
Standard Control
exp
wgEncodeEH000699
GSM935484
77 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3E2f1StdPk; md5sum=6966e3f6fb92af849a17e99931aa5616;
HeLa-S3
E2F1 (05-379)
None
Raw data
Standard Control
exp
wgEncodeEH000699
GSM935484
689 MB
fastq
2010-01-08
2010-10-08
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=928; controlId=wgEncodeEH000612; labVersion=HeLa cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to E2F1,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=3d8372e658e5788ce0332e9a024b524e;
HeLa-S3
E2F1 (05-379)
None
Raw data
Standard Control
exp
wgEncodeEH000699
GSM935484
791 MB
fastq
2010-01-08
2010-10-08
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=928; controlId=wgEncodeEH000612; labVersion=HeLa cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to E2F1,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=e8a54d879e87d07455e9d72e61ae96cc;
HeLa-S3
E2F1 (05-379)
None
Signal
Standard Control
exp
wgEncodeEH000699
GSM935484
434 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3E2f1StdSig; md5sum=687a52fa7464e482e36b929a422d0b75;
HeLa-S3
E2F4 (sc-866)
None
Alignments
Standard Control
exp
wgEncodeEH000689
5.8 MB
bam.bai
2009-09-29
2010-06-29
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=52909b0fba1f342a77cce4516fd797bc;
HeLa-S3
E2F4 (sc-866)
None
Alignments
Standard Control
exp
wgEncodeEH000689
1.0 GB
bam
2009-09-29
2010-06-29
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=1102aba1aa12ea60b5743c08c1a15bc1;
HeLa-S3
E2F4 (sc-866)
None
Alignments
Standard Control
exp
wgEncodeEH000689
5.8 MB
bam.bai
2009-09-29
2010-06-29
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=21ff09d102ca96efe22fd6a94b2b343a;
HeLa-S3
E2F4 (sc-866)
None
Alignments
Standard Control
exp
wgEncodeEH000689
890 MB
bam
2009-09-29
2010-06-29
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=c5394a36469626f06f06187d4ae9b175;
HeLa-S3
E2F4 (sc-866)
None
Peaks
Standard Control
exp
wgEncodeEH000689
GSM935365
26 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3E2f4StdPk; md5sum=1185dfc47054aa23bb66c7c43141647f;
HeLa-S3
E2F4 (sc-866)
None
Raw data
Standard Control
exp
wgEncodeEH000689
GSM935365
712 MB
fastq
2009-09-29
2010-06-29
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=587; controlId=wgEncodeEH000612; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=82456ebbc0da96d60f4b7a9c3b8745aa;
HeLa-S3
E2F4 (sc-866)
None
Raw data
Standard Control
exp
wgEncodeEH000689
GSM935365
863 MB
fastq
2009-09-29
2010-06-29
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=587; controlId=wgEncodeEH000612; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=493a93d8319e57be996bb3dac3ec7fd9;
HeLa-S3
E2F4 (sc-866)
None
Signal
Standard Control
exp
wgEncodeEH000689
GSM935365
374 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3E2f4StdSig; md5sum=e330a960b919f0979f68e3b080790c41;
HeLa-S3
E2F6 (sc-22823)
None
Alignments
Standard Control
exp
wgEncodeEH000692
5.7 MB
bam.bai
2009-10-21
2010-07-20
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=3858566693f36d79f5d9cc83bcc44cd0;
HeLa-S3
E2F6 (sc-22823)
None
Alignments
Standard Control
exp
wgEncodeEH000692
699 MB
bam
2009-10-21
2010-07-20
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1361; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=a119d62e67d72c6d3a22e36a70f54862;
HeLa-S3
E2F6 (sc-22823)
None
Alignments
Standard Control
exp
wgEncodeEH000692
5.6 MB
bam.bai
2009-10-21
2010-07-20
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=accae1f110cd2739e43b2da26f391bda;
HeLa-S3
E2F6 (sc-22823)
None
Alignments
Standard Control
exp
wgEncodeEH000692
431 MB
bam
2009-10-21
2010-07-20
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=a907681742a86f57cc8552d770cfa4f4;
HeLa-S3
E2F6 (sc-22823)
None
Peaks
Standard Control
exp
wgEncodeEH000692
GSM935476
27 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3E2f6StdPk; md5sum=c7440eebba777b30e17bdd0eb8762fdb;
HeLa-S3
E2F6 (sc-22823)
None
Raw data
Standard Control
exp
wgEncodeEH000692
GSM935476
332 MB
fastq
2009-10-21
2010-07-20
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=739; controlId=wgEncodeEH000612; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=afae26e55d6addca856f5345f288f4fb;
HeLa-S3
E2F6 (sc-22823)
None
Raw data
Standard Control
exp
wgEncodeEH000692
GSM935476
571 MB
fastq
2009-10-21
2010-07-20
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=739; controlId=wgEncodeEH000612; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=5585c9b8390a8b4250d6b26b1dcf0747;
HeLa-S3
E2F6 (sc-22823)
None
Signal
Standard Control
exp
wgEncodeEH000692
GSM935476
316 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3E2f6StdSig; md5sum=9f0593cc4e612f6394f5e9dd85077892;
HeLa-S3
ELK1 (1277-1)
None
Alignments
IgG-rab
exp
wgEncodeEH002864
6.0 MB
bam.bai
2012-03-01
2012-12-01
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5463; controlId=wgEncodeEH000744; md5sum=1783b549d45125511030958d3d71dae3;
HeLa-S3
ELK1 (1277-1)
None
Alignments
IgG-rab
exp
wgEncodeEH002864
610 MB
bam
2012-03-01
2012-12-01
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5463; controlId=wgEncodeEH000744; md5sum=53ee837f6a22a3998b823f1798820cc2;
HeLa-S3
ELK1 (1277-1)
None
Alignments
IgG-rab
exp
wgEncodeEH002864
5.8 MB
bam.bai
2012-03-01
2012-12-01
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5463; controlId=wgEncodeEH000744; md5sum=3a17adf1acaeb755c2bbd6ac8293dbf6;
HeLa-S3
ELK1 (1277-1)
None
Alignments
IgG-rab
exp
wgEncodeEH002864
483 MB
bam
2012-03-01
2012-12-01
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5463; controlId=wgEncodeEH000744; md5sum=cb45e291a64a1ae2eb65f8acc4cd5127;
HeLa-S3
ELK1 (1277-1)
None
Peaks
IgG-rab
exp
wgEncodeEH002864
GSM935326
471 KB
narrowPeak
2012-03-01
2012-12-01
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5463; controlId=wgEncodeEH000744; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsHelas3Elk112771IggrabPk; md5sum=7d0f94a2a9b03295b5172f8d91957e3d;
HeLa-S3
ELK1 (1277-1)
None
Raw data
IgG-rab
exp
wgEncodeEH002864
GSM935326
1003 MB
fastq.tgz
2012-03-01
2012-12-01
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5463; controlId=wgEncodeEH000744; md5sum=741b2052f83cc1268f3b46bbd98b5883;
HeLa-S3
ELK1 (1277-1)
None
Raw data
IgG-rab
exp
wgEncodeEH002864
GSM935326
1.1 GB
fastq.tgz
2012-03-01
2012-12-01
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5463; controlId=wgEncodeEH000744; md5sum=3cf9c3b6af09df3a9e3731125badf191;
HeLa-S3
ELK1 (1277-1)
None
Signal
IgG-rab
exp
wgEncodeEH002864
GSM935326
399 MB
bigWig
2012-03-01
2012-12-01
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5463; controlId=wgEncodeEH000744; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsHelas3Elk112771IggrabSig; md5sum=58837d25ab2d6cdfc6bdac6d72526b48;
HeLa-S3
ELK4 (sc-13030)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001753
5.7 MB
bam.bai
2010-04-27
2011-01-27
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1138; controlId=wgEncodeEH001754; md5sum=afbcd96e4d37d43321e772b812873d95;
HeLa-S3
ELK4 (sc-13030)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001753
342 MB
bam
2010-04-27
2011-01-27
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1138; controlId=wgEncodeEH001754; md5sum=d8198cea5e8bf31917b9fce31fdf012d;
HeLa-S3
ELK4 (sc-13030)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001753
5.7 MB
bam.bai
2010-04-27
2011-01-27
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1138; controlId=wgEncodeEH001754; md5sum=46880cdfdb44a14514568f7de07e5d5f;
HeLa-S3
ELK4 (sc-13030)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001753
281 MB
bam
2010-04-27
2011-01-27
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1138; controlId=wgEncodeEH001754; md5sum=780ae2365f8065b62e6c080ff595aaf0;
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1362; controlId=wgEncodeEH000612; labVersion=remapped from hg18, HeLa cells stably expressed a tagged HA-E2F1 were fragmented using a Bioruptor, precipitated with StaphA and an antibody to the HA tag, PeakSeq 1.0 (fdr 0.001); md5sum=4f3d322632eca41332fc76b6d66ee362;
HeLa-S3
HA-E2F1 (MMS-101P)
None
Alignments
Standard Control
exp
wgEncodeEH000688
327 MB
bam
2010-06-14
2011-03-14
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1362; controlId=wgEncodeEH000612; labVersion=remapped from hg18, HeLa cells stably expressed a tagged HA-E2F1 were fragmented using a Bioruptor, precipitated with StaphA and an antibody to the HA tag, PeakSeq 1.0 (fdr 0.001); md5sum=c9886b8fdd7ae6ba7169dd0667893460;
HeLa-S3
HA-E2F1 (MMS-101P)
None
Alignments
Standard Control
exp
wgEncodeEH000688
5.8 MB
bam.bai
2010-06-14
2011-03-14
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000612; labVersion=remapped from hg18, HeLa cells stably expressed a tagged HA-E2F1 were fragmented using a Bioruptor, precipitated with StaphA and an antibody to the HA tag, PeakSeq 1.0 (fdr 0.001); md5sum=c7fd8fb56a07df8387eea80da0234e32;
HeLa-S3
HA-E2F1 (MMS-101P)
None
Alignments
Standard Control
exp
wgEncodeEH000688
833 MB
bam
2010-06-14
2011-03-14
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000612; labVersion=remapped from hg18, HeLa cells stably expressed a tagged HA-E2F1 were fragmented using a Bioruptor, precipitated with StaphA and an antibody to the HA tag, PeakSeq 1.0 (fdr 0.001); md5sum=c04d23453a5092893ee2b7b0aa22cfbf;
HeLa-S3
HA-E2F1 (MMS-101P)
None
Peaks
Standard Control
exp
wgEncodeEH000688
GSM935366
123 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3Hae2f1StdPk; md5sum=e055d51a85d34190c0f8b53dfdc1844e;
HeLa-S3
HA-E2F1 (MMS-101P)
None
Raw data
Standard Control
exp
wgEncodeEH000688
GSM935366
258 MB
fastq
2009-09-28
2010-06-28
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=553; controlId=wgEncodeEH000612; labVersion=HeLa cells stably expressed a tagged HA-E2F1 were fragmented using a Bioruptor, precipitated with StaphA and an antibody to the HA tag,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=ee78067714d68dfb533c7dbe8b6335b7;
HeLa-S3
HA-E2F1 (MMS-101P)
None
Raw data
Standard Control
exp
wgEncodeEH000688
GSM935366
664 MB
fastq
2009-09-28
2010-06-28
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=553; controlId=wgEncodeEH000612; labVersion=HeLa cells stably expressed a tagged HA-E2F1 were fragmented using a Bioruptor, precipitated with StaphA and an antibody to the HA tag,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=88dcf69e7a285d4e0fc0603ce57984a0;
HeLa-S3
HA-E2F1 (MMS-101P)
None
Signal
Standard Control
exp
wgEncodeEH000688
GSM935366
311 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3Hae2f1StdSig; md5sum=37eecd5f8cc2be107324c8b997fc56ea;
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1383; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data set paired with HeLa-S3_MouseIgG_Control.; md5sum=cf52999818bb1955d859f5da653da804;
HeLa-S3
NRF1 (ab55744)
None
Alignments
IgG-mus
exp
wgEncodeEH000723
472 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1383; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data set paired with HeLa-S3_MouseIgG_Control.; md5sum=1edcd2cb33900a5811142a5a53fb048f;
HeLa-S3
NRF1 (ab55744)
None
Alignments
IgG-mus
exp
wgEncodeEH000723
5.8 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1372; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data set paired with HeLa-S3_MouseIgG_Control.; md5sum=48ecdad5d886ed282997b44e6ca7d2b3;
HeLa-S3
NRF1 (ab55744)
None
Alignments
IgG-mus
exp
wgEncodeEH000723
1.1 GB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1372; controlId=wgEncodeEH000633; labVersion=remapped from hg18, Data set paired with HeLa-S3_MouseIgG_Control.; md5sum=caa86d49a2faaa0c13f38f20228b520f;
HeLa-S3
NRF1 (ab55744)
None
Peaks
IgG-mus
exp
wgEncodeEH000723
GSM935636
57 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000633; tableName=wgEncodeSydhTfbsHelas3Nrf1IggmusPk; md5sum=e500c530d76a2ee2bceda7a6a5338385;
HeLa-S3
NRF1 (ab55744)
None
Raw data
IgG-mus
exp
wgEncodeEH000723
GSM935636
372 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=999; controlId=wgEncodeEH000633; labVersion=Data set paired with HeLa-S3_MouseIgG_Control.; md5sum=f860a42d13b1b3d198573bc1b31effd1;
HeLa-S3
NRF1 (ab55744)
None
Raw data
IgG-mus
exp
wgEncodeEH000723
GSM935636
829 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=999; controlId=wgEncodeEH000633; labVersion=Data set paired with HeLa-S3_MouseIgG_Control.; md5sum=44e277cfd1ce7d648105d810dd14322b;
HeLa-S3
NRF1 (ab55744)
None
Signal
IgG-mus
exp
wgEncodeEH000723
GSM935636
365 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000633; tableName=wgEncodeSydhTfbsHelas3Nrf1IggmusSig; md5sum=24028cf9640ad8be720c2c58d13cccca;
HeLa-S3
PRDM1 (9115)
None
Alignments
IgG-rab
exp
wgEncodeEH001817
5.8 MB
bam.bai
2010-10-20
2011-07-20
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2519; controlId=wgEncodeEH000744; md5sum=7e2f8f8b822c25778599ea5d47abde5e;
HeLa-S3
PRDM1 (9115)
None
Alignments
IgG-rab
exp
wgEncodeEH001817
390 MB
bam
2010-10-20
2011-07-20
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2519; controlId=wgEncodeEH000744; md5sum=e243daf8377bdefc8dc18137be37ee3f;
HeLa-S3
PRDM1 (9115)
None
Alignments
IgG-rab
exp
wgEncodeEH001817
5.7 MB
bam.bai
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2519; controlId=wgEncodeEH000744; md5sum=cfcbaf022c7f1c6bbc8397e96b563473;
HeLa-S3
PRDM1 (9115)
None
Alignments
IgG-rab
exp
wgEncodeEH001817
387 MB
bam
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2519; controlId=wgEncodeEH000744; md5sum=c5c9bb58c1d11d04a6c6206bf945525f;
lab=USC; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5255; controlId=wgEncodeEH001754; md5sum=62cedc37ee7b98c5bd61fc3394ed9549;
HeLa-S3
TCF7L2 C9B9 (2565)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002813
707 MB
bam
2011-12-19
2012-09-18
lab=USC; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5255; controlId=wgEncodeEH001754; md5sum=954b892485ed7cf90309f84b09a34d03;
HeLa-S3
TCF7L2 C9B9 (2565)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002813
6.0 MB
bam.bai
2011-12-19
2012-09-18
lab=USC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5255; controlId=wgEncodeEH001754; md5sum=c0d91059261ed0693c0c4e099091c601;
HeLa-S3
TCF7L2 C9B9 (2565)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002813
615 MB
bam
2011-12-19
2012-09-18
lab=USC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5255; controlId=wgEncodeEH001754; md5sum=10d68944ee6cccd3033daae46608d3fc;
HeLa-S3
TCF7L2 C9B9 (2565)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH002813
GSM935625
764 KB
narrowPeak
2011-12-19
2012-09-18
lab=USC; dataVersion=ENCODE Mar 2012 Freeze; subId=5255; controlId=wgEncodeEH001754; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsHelas3Tcf7l2c9b92565UcdPk; md5sum=f40a11e2ddd58a36781a358ee4a1cf3f;
HeLa-S3
TCF7L2 C9B9 (2565)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH002813
GSM935625
1.1 GB
fastq.tgz
2011-12-19
2012-09-18
lab=USC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5255; controlId=wgEncodeEH001754; md5sum=fc6ed9a24c7269e1c6da2c89153826a6;
HeLa-S3
TCF7L2 C9B9 (2565)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH002813
GSM935625
1.6 GB
fastq.tgz
2011-12-19
2012-09-18
lab=USC; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5255; controlId=wgEncodeEH001754; md5sum=da4aa270f9d19965080ae93545de2d68;
HeLa-S3
TCF7L2 C9B9 (2565)
None
Signal
UCDavis Input Control
exp
wgEncodeEH002813
GSM935625
460 MB
bigWig
2011-12-19
2012-09-18
lab=USC; dataVersion=ENCODE Mar 2012 Freeze; subId=5255; controlId=wgEncodeEH001754; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsHelas3Tcf7l2c9b92565UcdSig; md5sum=d6f029710727c9f2fcc80c96c55f5757;
HeLa-S3
TFIIIC-110 (4286)
None
Alignments
Standard Control
exp
wgEncodeEH000747
6.0 MB
bam.bai
2010-01-15
2010-10-15
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1342; controlId=wgEncodeEH000612; labVersion=remapped from hg18; md5sum=75656656f200a702446f9e2c14b78f0d;
HeLa-S3
TFIIIC-110 (4286)
None
Alignments
Standard Control
exp
wgEncodeEH000747
1.2 GB
bam
2010-01-15
2010-10-15
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1342; controlId=wgEncodeEH000612; labVersion=remapped from hg18; md5sum=b9d2201a99bcb195f209e09b7fb1ad67;
HeLa-S3
TFIIIC-110 (4286)
None
Alignments
Standard Control
exp
wgEncodeEH000747
6.0 MB
bam.bai
2010-01-15
2010-10-15
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1340; controlId=wgEncodeEH000612; labVersion=remapped from hg18; md5sum=625547bebd5e92e956c321b9df02f62e;
HeLa-S3
TFIIIC-110 (4286)
None
Alignments
Standard Control
exp
wgEncodeEH000747
1.3 GB
bam
2010-01-15
2010-10-15
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1340; controlId=wgEncodeEH000612; labVersion=remapped from hg18; md5sum=b64d315af0033241dc72d36b01436e76;
HeLa-S3
TFIIIC-110 (4286)
None
Peaks
Standard Control
exp
wgEncodeEH000747
GSM935342
84 KB
narrowPeak
2011-06-03
2012-03-03
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3Tf3c110StdPk; md5sum=2672f2f2644009f212527008fb24685c;
HeLa-S3
TFIIIC-110 (4286)
None
Raw data
Standard Control
exp
wgEncodeEH000747
GSM935342
996 MB
fastq
2010-01-15
2010-10-15
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1077; controlId=wgEncodeEH000612; md5sum=f38f103f84644790fd73b755dffe6abd;
HeLa-S3
TFIIIC-110 (4286)
None
Raw data
Standard Control
exp
wgEncodeEH000747
GSM935342
1.0 GB
fastq
2010-01-15
2010-10-15
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1077; controlId=wgEncodeEH000612; md5sum=100af29a366ef1918dc0116d5c2b172b;
HeLa-S3
TFIIIC-110 (4286)
None
Signal
Standard Control
exp
wgEncodeEH000747
GSM935342
443 MB
bigWig
2010-12-02
2011-09-01
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3Tf3c110StdSig; md5sum=0f7d29511ac97571890b32d549e69ef3;
HeLa-S3
TR4
None
Alignments
Standard Control
exp
wgEncodeEH000687
5.8 MB
bam.bai
2009-09-24
2010-06-24
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1362; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=d2d835826d82e9c954197388d8a24936;
HeLa-S3
TR4
None
Alignments
Standard Control
exp
wgEncodeEH000687
933 MB
bam
2009-09-24
2010-06-24
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1362; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=7e14564056405e5d0f31919a7be9cdbe;
HeLa-S3
TR4
None
Alignments
Standard Control
exp
wgEncodeEH000687
5.9 MB
bam.bai
2009-09-24
2010-06-24
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=ceb806ef0037c9e2dd114be0eaa00167;
HeLa-S3
TR4
None
Alignments
Standard Control
exp
wgEncodeEH000687
1003 MB
bam
2009-09-24
2010-06-24
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000612; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=aa38dedde915852fe43ccfb5b900d5d8;
HeLa-S3
TR4
None
Peaks
Standard Control
exp
wgEncodeEH000687
GSM935369
31 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3Tr4StdPk; md5sum=018ec46ccc5869ea1b2a5552d1d13d93;
HeLa-S3
TR4
None
Raw data
Standard Control
exp
wgEncodeEH000687
GSM935369
750 MB
fastq
2009-09-24
2010-06-24
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=538; controlId=wgEncodeEH000612; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=53796e5760085bf7bcf5e2851f76fb26;
HeLa-S3
TR4
None
Raw data
Standard Control
exp
wgEncodeEH000687
GSM935369
767 MB
fastq
2009-09-24
2010-06-24
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=538; controlId=wgEncodeEH000612; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=bc78ae473a0acadb8e3be742f183e3a1;
HeLa-S3
TR4
None
Signal
Standard Control
exp
wgEncodeEH000687
GSM935369
380 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000612; tableName=wgEncodeSydhTfbsHelas3Tr4StdSig; md5sum=262aa07fc12997260609a53d96318bb9;
HeLa-S3
USF2 (ab60931)
None
Alignments
IgG-mus
exp
wgEncodeEH001819
5.7 MB
bam.bai
2010-10-20
2011-07-20
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2522; controlId=wgEncodeEH000633; md5sum=f170e31f040f052d0dd984a233e444c1;
HeLa-S3
USF2 (ab60931)
None
Alignments
IgG-mus
exp
wgEncodeEH001819
372 MB
bam
2010-10-20
2011-07-20
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2522; controlId=wgEncodeEH000633; md5sum=1ec0748bb0295d16abeaa44a1798d90f;
HeLa-S3
USF2 (ab60931)
None
Alignments
IgG-mus
exp
wgEncodeEH001819
5.7 MB
bam.bai
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2522; controlId=wgEncodeEH000633; md5sum=174418f51b2f2c92dd64eca31ef7fe83;
HeLa-S3
USF2 (ab60931)
None
Alignments
IgG-mus
exp
wgEncodeEH001819
337 MB
bam
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2522; controlId=wgEncodeEH000633; md5sum=2a08f8108a463554e1d4a8bd89dc5963;
HeLa-S3
USF2 (ab60931)
None
Peaks
IgG-mus
exp
wgEncodeEH001819
GSM935561
910 KB
narrowPeak
2010-10-20
2011-07-20
lab=Stanford; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2522; controlId=wgEncodeEH000633; labVersion=PeakSeq1.0: We submit this dataset because of its high signal quality, although it narrowly missed the cut-off for replicate peak concordance; tableName=wgEncodeSydhTfbsHelas3Usf2IggmusPk; md5sum=73104677ddaf97f944ac7c8c97526bed;
HeLa-S3
USF2 (ab60931)
None
Raw data
IgG-mus
exp
wgEncodeEH001819
GSM935561
827 MB
fastq
2010-10-20
2011-07-20
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2522; controlId=wgEncodeEH000633; md5sum=f7c5bbabdf706b1a486d9a257ee79589;
HeLa-S3
USF2 (ab60931)
None
Raw data
IgG-mus
exp
wgEncodeEH001819
GSM935561
1.0 GB
fastq
2010-10-20
2011-07-20
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2522; controlId=wgEncodeEH000633; md5sum=4532de7b8e12226305cf787462670895;
lab=Harvard; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2093; controlId=wgEncodeEH000612; labVersion=Method of Chromatin Fragmentation: Sonication. Method of Immunopreciptation: Protein A Sepharose; md5sum=9dea8b0c87b9b8d6d6844a9d5111cbe7;
HeLa-S3
ZZZ3
None
Raw data
Standard Control
exp
wgEncodeEH001872
GSM935416
1.0 GB
fastq
2010-08-17
2011-05-17
lab=Harvard; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=2093; controlId=wgEncodeEH000612; labVersion=Method of Chromatin Fragmentation: Sonication. Method of Immunopreciptation: Protein A Sepharose; md5sum=cf0c891b1e2c7a610e83039de45cfaa9;
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3871; controlId=wgEncodeEH001791; md5sum=67f4e28d7c2f3717db1ffd6fac4d202f;
HepG2
BRCA1 (A300-000A)
None
Alignments
IgG-rab
exp
wgEncodeEH001859
467 MB
bam
2011-03-31
2011-12-31
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3871; controlId=wgEncodeEH001791; md5sum=0a15c231c84bfad9786707e2e6208e85;
HepG2
BRCA1 (A300-000A)
None
Alignments
IgG-rab
exp
wgEncodeEH001859
5.8 MB
bam.bai
2011-03-31
2011-12-31
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3871; controlId=wgEncodeEH001791; md5sum=6dca70227dda7811de0b99988ef45a7c;
HepG2
BRCA1 (A300-000A)
None
Alignments
IgG-rab
exp
wgEncodeEH001859
332 MB
bam
2011-03-31
2011-12-31
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3871; controlId=wgEncodeEH001791; md5sum=575daf5cdfeb7b0879be03cfaccfee6a;
HepG2
BRCA1 (A300-000A)
None
Peaks
IgG-rab
exp
wgEncodeEH001859
GSM935609
320 KB
narrowPeak
2011-03-31
2011-12-31
lab=Stanford; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3871; controlId=wgEncodeEH001791; labVersion=PeakSeq1.0. Although this dataset narrowly misses the ENCODE standard for peak concordance, we submit this data because we feel it is of good quality and will be particularly valuable for comparison to BRCA1 datasets in other cell lines.; tableName=wgEncodeSydhTfbsHepg2Brca1a300IggrabPk; md5sum=9af5f467ee5ede712ec8922a2dbdb5e7;
HepG2
BRCA1 (A300-000A)
None
Raw data
IgG-rab
exp
wgEncodeEH001859
GSM935609
582 MB
fastq
2011-03-31
2011-12-31
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3871; controlId=wgEncodeEH001791; md5sum=12cdf8977e83db4a8c3eadd8309360f8;
HepG2
BRCA1 (A300-000A)
None
Raw data
IgG-rab
exp
wgEncodeEH001859
GSM935609
1.1 GB
fastq
2011-03-31
2011-12-31
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3871; controlId=wgEncodeEH001791; md5sum=f7d8f37b7bd3ae01505e76807fe68a40;
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1362; controlId=wgEncodeEH000674; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=6da384c6a4fa0b09e23c7cae156ddf88;
HepG2
TR4
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000675
710 MB
bam
2009-06-12
2010-03-11
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1362; controlId=wgEncodeEH000674; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=c5a996871eaf0f5989b4b721154a8bc4;
HepG2
TR4
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000675
5.8 MB
bam.bai
2009-06-12
2010-03-11
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000674; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=9e0a011c35f8754616ba62174b2a6c23;
HepG2
TR4
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000675
379 MB
bam
2009-06-12
2010-03-11
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000674; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=6dd2df33c6f167e3305b679a3b465b11;
HepG2
TR4
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000675
GSM935596
36 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000674; tableName=wgEncodeSydhTfbsHepg2Tr4UcdPk; md5sum=ba36c7bacb35c0dfa9bffe78ae4c0076;
HepG2
TR4
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000675
GSM935596
300 MB
fastq
2009-06-12
2010-03-11
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=372; controlId=wgEncodeEH000674; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=1002a7136afacb93381ab1700f1ff101;
HepG2
TR4
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000675
GSM935596
542 MB
fastq
2009-06-12
2010-03-11
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=372; controlId=wgEncodeEH000674; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=9e772f81822599a22253e3abf7e56a7d;
HepG2
TR4
None
Signal
UCDavis Input Control
exp
wgEncodeEH000675
GSM935596
339 MB
bigWig
2010-12-02
2011-09-01
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000674; tableName=wgEncodeSydhTfbsHepg2Tr4UcdSig; md5sum=de3c49510834a2ef3ad2d2b52697b3f4;
HepG2
USF2 (ab60931)
None
Alignments
IgG-rab
exp
wgEncodeEH001804
5.9 MB
bam.bai
2010-06-11
2011-03-11
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1357; controlId=wgEncodeEH001791; md5sum=20a892e72fd6c25c12d2ab1285c9583d;
HepG2
USF2 (ab60931)
None
Alignments
IgG-rab
exp
wgEncodeEH001804
452 MB
bam
2010-06-11
2011-03-11
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1357; controlId=wgEncodeEH001791; md5sum=f1119dedb68698e8d80410019a8d76b2;
HepG2
USF2 (ab60931)
None
Alignments
IgG-rab
exp
wgEncodeEH001804
5.8 MB
bam.bai
2010-06-11
2011-03-11
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1357; controlId=wgEncodeEH001791; md5sum=fa031ce09dd53fdcd88ef52d143d8c6e;
HepG2
USF2 (ab60931)
None
Alignments
IgG-rab
exp
wgEncodeEH001804
354 MB
bam
2010-06-11
2011-03-11
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1357; controlId=wgEncodeEH001791; md5sum=a48a47636c9b56acf6a6ba8d5615e319;
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1190; controlId=wgEncodeEH000674; md5sum=16103299951e9e8e18d0c8d8a164db56;
HepG2
ZNF274 (H00010782-A01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001755
452 MB
bam
2010-05-10
2011-02-10
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1190; controlId=wgEncodeEH000674; md5sum=c15dd02fc153d832c4397caf7e4a70e3;
HepG2
ZNF274 (H00010782-A01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001755
5.6 MB
bam.bai
2010-05-10
2011-02-10
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1190; controlId=wgEncodeEH000674; md5sum=56efa999c3f5d49494b25a714ed300dd;
HepG2
ZNF274 (H00010782-A01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH001755
169 MB
bam
2010-05-10
2011-02-10
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1190; controlId=wgEncodeEH000674; md5sum=dc0c8348f23be838f028c1f0bf4564a6;
HepG2
ZNF274 (H00010782-A01)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH001755
GSM935350
11 KB
narrowPeak
2010-05-10
2011-02-10
lab=USC; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1190; controlId=wgEncodeEH000674; labVersion=PeakSeq1.0. Replicate overlap below cutoff, but submitted because there are very few biologically real targets and all the targets are in heterochromatic regions.; tableName=wgEncodeSydhTfbsHepg2Znf274UcdPk; md5sum=b4448df9d770ca085e592709c679bab0;
HepG2
ZNF274 (H00010782-A01)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH001755
GSM935350
601 MB
fastq
2010-05-10
2011-02-10
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1190; controlId=wgEncodeEH000674; labVersion=Method of Chromatin Fragmentation: Sonication. Method of Immunoprecipitation: StaphA; md5sum=4fa1a0b80eb90bd9ad40370417a9ce26;
HepG2
ZNF274 (H00010782-A01)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH001755
GSM935350
718 MB
fastq
2010-05-10
2011-02-10
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1190; controlId=wgEncodeEH000674; labVersion=Method of Chromatin Fragmentation: Sonication. Method of Immunoprecipitation: StaphA; md5sum=a634712b5de39bba2faa969612384063;
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5257; controlId=wgEncodeEH002808; md5sum=f2d8ef0de0ecacd4f901f50afd235538;
IMR90
RAD21 (ab992)
None
Alignments
IgG-rab
exp
wgEncodeEH002810
589 MB
bam
2011-12-18
2012-09-18
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5257; controlId=wgEncodeEH002808; md5sum=c7831ef67d475b7864553e09eedaf9fe;
IMR90
RAD21 (ab992)
None
Alignments
IgG-rab
exp
wgEncodeEH002810
5.9 MB
bam.bai
2011-12-18
2012-09-18
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5257; controlId=wgEncodeEH002808; md5sum=35a62ed78432fb11354d7f069b3924f8;
IMR90
RAD21 (ab992)
None
Alignments
IgG-rab
exp
wgEncodeEH002810
520 MB
bam
2011-12-18
2012-09-18
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5257; controlId=wgEncodeEH002808; md5sum=b11475be16d767a80406d0ab45757d2b;
IMR90
RAD21 (ab992)
None
Peaks
IgG-rab
exp
wgEncodeEH002810
GSM935624
1.1 MB
narrowPeak
2011-12-18
2012-09-18
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5257; controlId=wgEncodeEH002808; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsImr90Rad21IggrabPk; md5sum=13dd5001dd1af9d65091c3e47bd2a017;
IMR90
RAD21 (ab992)
None
Raw data
IgG-rab
exp
wgEncodeEH002810
GSM935624
983 MB
fastq.tgz
2011-12-18
2012-09-18
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5257; controlId=wgEncodeEH002808; md5sum=6c5122780f3c62f9502d51248680e241;
IMR90
RAD21 (ab992)
None
Raw data
IgG-rab
exp
wgEncodeEH002810
GSM935624
1.1 GB
fastq.tgz
2011-12-18
2012-09-18
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5257; controlId=wgEncodeEH002808; md5sum=d712add8c6cdc18d9bc15acffb085064;
IMR90
RAD21 (ab992)
None
Signal
IgG-rab
exp
wgEncodeEH002810
GSM935624
395 MB
bigWig
2011-12-18
2012-09-18
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5257; controlId=wgEncodeEH002808; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsImr90Rad21IggrabSig; md5sum=04e22560755cec8e078fb1655c02d818;
K562
ARID3A (sc-8821)
None
Alignments
IgG-rab
exp
wgEncodeEH002861
5.7 MB
bam.bai
2012-02-28
2012-11-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5519; controlId=wgEncodeEH001795; md5sum=735b6cafb6a594f3002f36e5e4c0da63;
K562
ARID3A (sc-8821)
None
Alignments
IgG-rab
exp
wgEncodeEH002861
278 MB
bam
2012-02-28
2012-11-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5519; controlId=wgEncodeEH001795; md5sum=8f4207cd3ef777b56e2320eb84f319fe;
K562
ARID3A (sc-8821)
None
Alignments
IgG-rab
exp
wgEncodeEH002861
5.9 MB
bam.bai
2012-02-28
2012-11-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5519; controlId=wgEncodeEH001795; md5sum=cb0a0657102fa0eea5cdd7576823f231;
K562
ARID3A (sc-8821)
None
Alignments
IgG-rab
exp
wgEncodeEH002861
548 MB
bam
2012-02-28
2012-11-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5519; controlId=wgEncodeEH001795; md5sum=aa43f59c59dd0b2fd5bfdc9d473c7de3;
K562
ARID3A (sc-8821)
None
Peaks
IgG-rab
exp
wgEncodeEH002861
GSM935336
830 KB
narrowPeak
2012-02-28
2012-11-28
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5519; controlId=wgEncodeEH001795; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Arid3asc8821IggrabPk; md5sum=cb26007d18a7cf24a0b680ad24cb1d4a;
K562
ARID3A (sc-8821)
None
Raw data
IgG-rab
exp
wgEncodeEH002861
GSM935336
499 MB
fastq.tgz
2012-02-28
2012-11-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5519; controlId=wgEncodeEH001795; md5sum=50dd9c710c53e8f2c0ac475c15a465d8;
K562
ARID3A (sc-8821)
None
Raw data
IgG-rab
exp
wgEncodeEH002861
GSM935336
984 MB
fastq.tgz
2012-02-28
2012-11-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5519; controlId=wgEncodeEH001795; md5sum=e991d0d7f1f1d6d5e14945e78a9d3fc8;
K562
ARID3A (sc-8821)
None
Signal
IgG-rab
exp
wgEncodeEH002861
GSM935336
318 MB
bigWig
2012-02-28
2012-11-28
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5519; controlId=wgEncodeEH001795; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Arid3asc8821IggrabSig; md5sum=4dca09c6e79410bec758fa62e6c3e184;
K562
ATF1 (06-325)
None
Alignments
Standard Control
exp
wgEncodeEH002865
6.0 MB
bam.bai
2012-03-13
2012-12-13
lab=Harvard; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5047; controlId=wgEncodeEH000615; md5sum=37556c4260a8e96a66b413297cd19be3;
K562
ATF1 (06-325)
None
Alignments
Standard Control
exp
wgEncodeEH002865
656 MB
bam
2012-03-13
2012-12-13
lab=Harvard; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5047; controlId=wgEncodeEH000615; md5sum=9e5ea5e2246e678839920cb827ae472e;
K562
ATF1 (06-325)
None
Alignments
Standard Control
exp
wgEncodeEH002865
6.0 MB
bam.bai
2012-03-13
2012-12-13
lab=Harvard; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5047; controlId=wgEncodeEH000615; md5sum=bfc36875d32aed9ba749229704ee21dc;
K562
ATF1 (06-325)
None
Alignments
Standard Control
exp
wgEncodeEH002865
592 MB
bam
2012-03-13
2012-12-13
lab=Harvard; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5047; controlId=wgEncodeEH000615; md5sum=39b0e9a06a04b0271929092b25490f4c;
K562
ATF1 (06-325)
None
Peaks
Standard Control
exp
wgEncodeEH002865
GSM935340
814 KB
narrowPeak
2012-03-13
2012-12-13
lab=Harvard; dataVersion=ENCODE Mar 2012 Freeze; subId=5047; controlId=wgEncodeEH000615; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Atf106325StdPk; md5sum=95c2925ddbe06732dab3375c07d57fd0;
K562
ATF1 (06-325)
None
Raw data
Standard Control
exp
wgEncodeEH002865
GSM935340
1.3 GB
fastq.tgz
2012-03-13
2012-12-13
lab=Harvard; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5047; controlId=wgEncodeEH000615; md5sum=65771d5d5f419472f9f866dcaa16e408;
K562
ATF1 (06-325)
None
Raw data
Standard Control
exp
wgEncodeEH002865
GSM935340
1.6 GB
fastq.tgz
2012-03-13
2012-12-13
lab=Harvard; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5047; controlId=wgEncodeEH000615; md5sum=41b332767bef746725f268efb4eb0fa6;
K562
ATF1 (06-325)
None
Signal
Standard Control
exp
wgEncodeEH002865
GSM935340
410 MB
bigWig
2012-03-13
2012-12-13
lab=Harvard; dataVersion=ENCODE Mar 2012 Freeze; subId=5047; controlId=wgEncodeEH000615; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Atf106325StdSig; md5sum=29cfd49de2206195dc3c4410ed1f7ab8;
K562
ATF3 (sc-188)
None
Alignments
Standard Control
exp
wgEncodeEH000700
5.8 MB
bam.bai
2010-01-09
2010-10-09
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1342; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=c33936bed25011399b9ae550f2e469e0;
K562
ATF3 (sc-188)
None
Alignments
Standard Control
exp
wgEncodeEH000700
843 MB
bam
2010-01-09
2010-10-09
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1342; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=41290ca31331cf440a7df44690d6b903;
K562
ATF3 (sc-188)
None
Alignments
Standard Control
exp
wgEncodeEH000700
5.7 MB
bam.bai
2010-01-09
2010-10-09
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1340; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=e127b5ef16b2745531eea690cb83ac2c;
K562
ATF3 (sc-188)
None
Alignments
Standard Control
exp
wgEncodeEH000700
532 MB
bam
2010-01-09
2010-10-09
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1340; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=dd41a5025c35d54529d541b2b0f2ba4c;
K562
ATF3 (sc-188)
None
Peaks
Standard Control
exp
wgEncodeEH000700
GSM935391
16 KB
narrowPeak
2011-06-03
2012-03-03
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Atf3StdPk; md5sum=bb4b58423b77a01e4bde05290e5f507b;
K562
ATF3 (sc-188)
None
Raw data
Standard Control
exp
wgEncodeEH000700
GSM935391
411 MB
fastq
2010-01-09
2010-10-09
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=951; controlId=wgEncodeEH000615; md5sum=439c941c937f3cc9f430f45015447055;
K562
ATF3 (sc-188)
None
Raw data
Standard Control
exp
wgEncodeEH000700
GSM935391
655 MB
fastq
2010-01-09
2010-10-09
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=951; controlId=wgEncodeEH000615; md5sum=c611192a803de171681a0bb310ca01be;
K562
ATF3 (sc-188)
None
Signal
Standard Control
exp
wgEncodeEH000700
GSM935391
354 MB
bigWig
2010-12-02
2011-09-01
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Atf3StdSig; md5sum=441597c9714f4366e2c52f709d302949;
K562
BDP1 (2663)
None
Alignments
Standard Control
exp
wgEncodeEH000678
5.7 MB
bam.bai
2009-06-22
2010-03-22
lab=Harvard; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1344; controlId=wgEncodeEH000615; labVersion=remapped from hg18, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=ca4443e439cfa77a9da3003a7f5cb078;
K562
BDP1 (2663)
None
Alignments
Standard Control
exp
wgEncodeEH000678
747 MB
bam
2009-06-22
2010-03-22
lab=Harvard; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1344; controlId=wgEncodeEH000615; labVersion=remapped from hg18, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=f181d0b9cbddb4b386f11696bcbc5d0b;
K562
BDP1 (2663)
None
Alignments
Standard Control
exp
wgEncodeEH000678
5.7 MB
bam.bai
2009-06-22
2010-03-22
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1342; controlId=wgEncodeEH000615; labVersion=remapped from hg18, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=a37b11d0d6c8001c930ea1db913b72db;
K562
BDP1 (2663)
None
Alignments
Standard Control
exp
wgEncodeEH000678
768 MB
bam
2009-06-22
2010-03-22
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1342; controlId=wgEncodeEH000615; labVersion=remapped from hg18, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=4a9ff97cf0c0c9af4c9b4944d28948fd;
K562
BDP1 (2663)
None
Alignments
Standard Control
exp
wgEncodeEH000678
5.7 MB
bam.bai
2009-06-22
2010-03-22
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1340; controlId=wgEncodeEH000615; labVersion=remapped from hg18, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=5a1b410b310af1d18700b56bb0e8ba17;
K562
BDP1 (2663)
None
Alignments
Standard Control
exp
wgEncodeEH000678
697 MB
bam
2009-06-22
2010-03-22
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1340; controlId=wgEncodeEH000615; labVersion=remapped from hg18, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=d49ce28e0bd1bfcd683d946548f6ffa3;
K562
BDP1 (2663)
None
Peaks
Standard Control
exp
wgEncodeEH000678
GSM935594
8.8 KB
narrowPeak
2011-06-03
2012-03-03
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Bdp1StdPk; md5sum=77ddebdfd55e26dbf3ad35aa4d74749f;
K562
BDP1 (2663)
None
Raw data
Standard Control
exp
wgEncodeEH000678
GSM935594
522 MB
fastq
2009-06-22
2010-03-22
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=383; controlId=wgEncodeEH000615; labVersion=fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=5746bf3784e9071760dade1f9a682202;
K562
BDP1 (2663)
None
Raw data
Standard Control
exp
wgEncodeEH000678
GSM935594
565 MB
fastq
2009-06-22
2010-03-22
lab=Harvard; replicate=3; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=383; controlId=wgEncodeEH000615; labVersion=fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=d7308abd509e221c07a513f52f66cb7c;
K562
BDP1 (2663)
None
Raw data
Standard Control
exp
wgEncodeEH000678
GSM935594
579 MB
fastq
2009-06-22
2010-03-22
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=383; controlId=wgEncodeEH000615; labVersion=fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=63175ee7a95f52a9cc7df9bf8848d18b;
K562
BDP1 (2663)
None
Signal
Standard Control
exp
wgEncodeEH000678
GSM935594
471 MB
bigWig
2010-12-02
2011-09-01
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Bdp1StdSig; md5sum=d5eca9316e3a7a79977525c21a2a80ac;
K562
BHLHE40 (NB100-1800)
None
Alignments
IgG-rab
exp
wgEncodeEH001857
5.9 MB
bam.bai
2011-02-25
2011-11-25
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3755; controlId=wgEncodeEH001795; md5sum=97990d16a67ba7ca97ebcf9c1370505c;
K562
BHLHE40 (NB100-1800)
None
Alignments
IgG-rab
exp
wgEncodeEH001857
602 MB
bam
2011-02-25
2011-11-25
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3755; controlId=wgEncodeEH001795; md5sum=8971f3de81f7c9c87f9a6b3e3a5bb185;
K562
BHLHE40 (NB100-1800)
None
Alignments
IgG-rab
exp
wgEncodeEH001857
5.9 MB
bam.bai
2011-02-25
2011-11-25
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3755; controlId=wgEncodeEH001795; md5sum=aa6e35188960fcd51ec39a04fd839e6a;
K562
BHLHE40 (NB100-1800)
None
Alignments
IgG-rab
exp
wgEncodeEH001857
566 MB
bam
2011-02-25
2011-11-25
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=3755; controlId=wgEncodeEH001795; md5sum=023fa258daff5c2051b033cae073e587;
lab=Harvard; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1344; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=042f9ce6527b3d48c7aa37e6e4894c08;
K562
BRF1 (128)
None
Alignments
Standard Control
exp
wgEncodeEH000679
112 MB
bam
2009-06-22
2010-03-22
lab=Harvard; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1344; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=73e014ea5121f7386d838bd76af92e09;
K562
BRF1 (128)
None
Alignments
Standard Control
exp
wgEncodeEH000679
5.6 MB
bam.bai
2009-06-22
2010-03-22
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1342; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=bbfe8f26cd0a6a74c65ffbe3cffd5e3c;
K562
BRF1 (128)
None
Alignments
Standard Control
exp
wgEncodeEH000679
210 MB
bam
2009-06-22
2010-03-22
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1342; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=7ef5e0a402350f666cb16497d825d0e7;
K562
BRF1 (128)
None
Alignments
Standard Control
exp
wgEncodeEH000679
5.6 MB
bam.bai
2009-06-22
2010-03-22
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1340; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=9c9fc82989c2b11d93e668ac18a428e3;
K562
BRF1 (128)
None
Alignments
Standard Control
exp
wgEncodeEH000679
274 MB
bam
2009-06-22
2010-03-22
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1340; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=cec4e8359801f6b2778d77857a5d1984;
K562
BRF1 (128)
None
Peaks
Standard Control
exp
wgEncodeEH000679
GSM935595
1.9 KB
narrowPeak
2011-06-03
2012-03-03
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Brf1StdPk; md5sum=2c48e5cbdc23bf72359224b3c7554089;
K562
BRF1 (128)
None
Raw data
Standard Control
exp
wgEncodeEH000679
GSM935595
88 MB
fastq
2009-06-22
2010-03-22
lab=Harvard; replicate=3; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=384; controlId=wgEncodeEH000615; labVersion=Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=8ca4dd516a9e839ee446bacb7c9ff332;
K562
BRF1 (128)
None
Raw data
Standard Control
exp
wgEncodeEH000679
GSM935595
157 MB
fastq
2009-06-22
2010-03-22
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=384; controlId=wgEncodeEH000615; labVersion=Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=24cf38467a29f009d27f8077dd0bd481;
K562
BRF1 (128)
None
Raw data
Standard Control
exp
wgEncodeEH000679
GSM935595
215 MB
fastq
2009-06-22
2010-03-22
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=384; controlId=wgEncodeEH000615; labVersion=Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=11ad8cb0f7853431a6b85b8535da3bc5;
K562
BRF1 (128)
None
Signal
Standard Control
exp
wgEncodeEH000679
GSM935595
305 MB
bigWig
2010-12-02
2011-09-01
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Brf1StdSig; md5sum=b7fcffdbfbe5318ff9d25da9c2acb406;
K562
BRF2 (4295)
None
Alignments
Standard Control
exp
wgEncodeEH000767
5.7 MB
bam.bai
2010-01-16
2010-10-15
lab=Harvard; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1344; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=9f1535656cf9791d1e07d732fc764771;
K562
BRF2 (4295)
None
Alignments
Standard Control
exp
wgEncodeEH000767
562 MB
bam
2010-01-16
2010-10-15
lab=Harvard; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1344; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=8b4d8d2ce10540fdd564eea8f59d1665;
K562
BRF2 (4295)
None
Alignments
Standard Control
exp
wgEncodeEH000767
5.7 MB
bam.bai
2010-01-16
2010-10-15
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1342; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=e1e46e908cbab801c58c47b1bb049013;
K562
BRF2 (4295)
None
Alignments
Standard Control
exp
wgEncodeEH000767
708 MB
bam
2010-01-16
2010-10-15
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1342; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=f4abeba64a2d9886a8bf70d7678d432d;
K562
BRF2 (4295)
None
Alignments
Standard Control
exp
wgEncodeEH000767
5.7 MB
bam.bai
2010-01-16
2010-10-15
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1341; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=cc4ed9d69d528f9e495e36451aebaff8;
K562
BRF2 (4295)
None
Alignments
Standard Control
exp
wgEncodeEH000767
702 MB
bam
2010-01-16
2010-10-15
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1341; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=2e9b80c6510ccecdd14165f1bc6f6f18;
K562
BRF2 (4295)
None
Peaks
Standard Control
exp
wgEncodeEH000767
GSM935490
664 B
narrowPeak
2011-06-03
2012-03-03
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Brf2StdPk; md5sum=4932aa8b0f3f34a2c5fe3decb67eb76f;
K562
BRF2 (4295)
None
Raw data
Standard Control
exp
wgEncodeEH000767
GSM935490
413 MB
fastq
2010-01-16
2010-10-15
lab=Harvard; replicate=3; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1083; controlId=wgEncodeEH000615; md5sum=45cce05875294332e177c31a1a5d0100;
K562
BRF2 (4295)
None
Raw data
Standard Control
exp
wgEncodeEH000767
GSM935490
523 MB
fastq
2010-01-16
2010-10-15
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1083; controlId=wgEncodeEH000615; md5sum=506b83ebc3758b93828deae47a954f09;
K562
BRF2 (4295)
None
Raw data
Standard Control
exp
wgEncodeEH000767
GSM935490
524 MB
fastq
2010-01-16
2010-10-15
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1083; controlId=wgEncodeEH000615; md5sum=e73cba10b39583ddf532c96efc11cc88;
K562
BRF2 (4295)
None
Signal
Standard Control
exp
wgEncodeEH000767
GSM935490
451 MB
bigWig
2010-12-02
2011-09-01
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Brf2StdSig; md5sum=68720131f6b20380b56e36eafed86c4f;
K562
BACH1 (sc-14700)
None
Alignments
IgG-rab
exp
wgEncodeEH002846
5.9 MB
bam.bai
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5543; controlId=wgEncodeEH001795; md5sum=e9dc05c792cf3cc631780c3fd7e08d3a;
K562
BACH1 (sc-14700)
None
Alignments
IgG-rab
exp
wgEncodeEH002846
572 MB
bam
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5543; controlId=wgEncodeEH001795; md5sum=a84781e7f5c1472812796f67f338ef91;
K562
BACH1 (sc-14700)
None
Alignments
IgG-rab
exp
wgEncodeEH002846
5.7 MB
bam.bai
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5543; controlId=wgEncodeEH001795; md5sum=a261a58fb2a503c96514ae3083518ee0;
K562
BACH1 (sc-14700)
None
Alignments
IgG-rab
exp
wgEncodeEH002846
350 MB
bam
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5543; controlId=wgEncodeEH001795; md5sum=02b7d30e018db2996c7d0f28bd0c4f96;
K562
BACH1 (sc-14700)
None
Peaks
IgG-rab
exp
wgEncodeEH002846
GSM935576
420 KB
narrowPeak
2012-02-27
2012-11-27
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5543; controlId=wgEncodeEH001795; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Bach1sc14700IggrabPk; md5sum=42895329fc8db2bc4549f005a13e4d72;
K562
BACH1 (sc-14700)
None
Raw data
IgG-rab
exp
wgEncodeEH002846
GSM935576
830 MB
fastq.tgz
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5543; controlId=wgEncodeEH001795; md5sum=910cf99cd9fd3d4be79c12f990005c72;
K562
BACH1 (sc-14700)
None
Raw data
IgG-rab
exp
wgEncodeEH002846
GSM935576
1.3 GB
fastq.tgz
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5543; controlId=wgEncodeEH001795; md5sum=d2a7dbf4e5427043fec6b00cb1073b3f;
K562
BACH1 (sc-14700)
None
Signal
IgG-rab
exp
wgEncodeEH002846
GSM935576
354 MB
bigWig
2012-02-27
2012-11-27
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5543; controlId=wgEncodeEH001795; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Bach1sc14700IggrabSig; md5sum=621fdc798641dc27875520888ed3d2ad;
K562
BRG1 (sc-17796)
None
Alignments
IgG-mus
exp
wgEncodeEH000724
5.8 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1398; controlId=wgEncodeEH000726; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with IgG_Control.; md5sum=b7368c77bd59dc06fc9adf7f1fb2b55f;
K562
BRG1 (sc-17796)
None
Alignments
IgG-mus
exp
wgEncodeEH000724
623 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1398; controlId=wgEncodeEH000726; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with IgG_Control.; md5sum=59d4f06d76918d172045b04960d1eed6;
K562
BRG1 (sc-17796)
None
Alignments
IgG-mus
exp
wgEncodeEH000724
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1373; controlId=wgEncodeEH000726; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with IgG_Control.; md5sum=45f2566e7221e78db15ddae48e0a2fd3;
K562
BRG1 (sc-17796)
None
Alignments
IgG-mus
exp
wgEncodeEH000724
543 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1373; controlId=wgEncodeEH000726; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded. Data paired with IgG_Control.; md5sum=303593e36233e4e5dfb7767b2d3d1b7e;
K562
BRG1 (sc-17796)
None
Peaks
IgG-mus
exp
wgEncodeEH000724
GSM935633
16 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000726; tableName=wgEncodeSydhTfbsK562Brg1IggmusPk; md5sum=8b8df75e28cdea9eb62cef888fd2437f;
K562
BRG1 (sc-17796)
None
Raw data
IgG-mus
exp
wgEncodeEH000724
GSM935633
425 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=893; controlId=wgEncodeEH000726; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with IgG_Control.; md5sum=00dc0db379eb90a20f44b9494b440acf;
K562
BRG1 (sc-17796)
None
Raw data
IgG-mus
exp
wgEncodeEH000724
GSM935633
488 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=893; controlId=wgEncodeEH000726; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with IgG_Control.; md5sum=bb116828ee18c65159397e77d3433e0a;
K562
BRG1 (sc-17796)
None
Signal
IgG-mus
exp
wgEncodeEH000724
GSM935633
398 MB
bigWig
2010-12-02
2011-09-01
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3055; controlId=wgEncodeEH000726; tableName=wgEncodeSydhTfbsK562Brg1IggmusSig; md5sum=958e6298c263fd7bdbc40a51d437230b;
K562
CCNT2 (sc-12419)
None
Alignments
Standard Control
exp
wgEncodeEH001864
5.7 MB
bam.bai
2010-04-28
2011-01-28
lab=Harvard; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1147; controlId=wgEncodeEH000615; md5sum=48cb7bcf1949bc8f17a3f4b0e7738391;
K562
CCNT2 (sc-12419)
None
Alignments
Standard Control
exp
wgEncodeEH001864
334 MB
bam
2010-04-28
2011-01-28
lab=Harvard; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1147; controlId=wgEncodeEH000615; md5sum=79ff0c0fa0512e1340a9f8b125762807;
K562
CCNT2 (sc-12419)
None
Alignments
Standard Control
exp
wgEncodeEH001864
5.5 MB
bam.bai
2010-04-28
2011-01-28
lab=Harvard; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1147; controlId=wgEncodeEH000615; md5sum=9a378c230353a05c8d848581b5ebf33e;
K562
CCNT2 (sc-12419)
None
Alignments
Standard Control
exp
wgEncodeEH001864
166 MB
bam
2010-04-28
2011-01-28
lab=Harvard; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1147; controlId=wgEncodeEH000615; md5sum=6da64e128bc85b81a9aca726c52d2e49;
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5520; controlId=wgEncodeEH001795; md5sum=53100dcd25373536e1d486cc559e5b65;
K562
RCOR1/COREST (ab24166)
None
Alignments
IgG-rab
exp
wgEncodeEH002847
569 MB
bam
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5520; controlId=wgEncodeEH001795; md5sum=28e57f62bf6cf3c9d303bddf4a473d15;
K562
RCOR1/COREST (ab24166)
None
Alignments
IgG-rab
exp
wgEncodeEH002847
5.8 MB
bam.bai
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5520; controlId=wgEncodeEH001795; md5sum=c9cc9e756bc0514ab7567148073b2c4e;
K562
RCOR1/COREST (ab24166)
None
Alignments
IgG-rab
exp
wgEncodeEH002847
416 MB
bam
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5520; controlId=wgEncodeEH001795; md5sum=4621ce73ff075553a8554756a2e51e80;
K562
RCOR1/COREST (ab24166)
None
Peaks
IgG-rab
exp
wgEncodeEH002847
GSM935385
960 KB
narrowPeak
2012-02-27
2012-11-27
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5520; controlId=wgEncodeEH001795; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Corestab24166IggrabPk; md5sum=46643afa087886801b6ca67ad4b89878;
K562
RCOR1/COREST (ab24166)
None
Raw data
IgG-rab
exp
wgEncodeEH002847
GSM935385
840 MB
fastq.tgz
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5520; controlId=wgEncodeEH001795; md5sum=c3fad2f19fb50b0b65a6c4c3bf66aed6;
K562
RCOR1/COREST (ab24166)
None
Raw data
IgG-rab
exp
wgEncodeEH002847
GSM935385
1.1 GB
fastq.tgz
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5520; controlId=wgEncodeEH001795; md5sum=3cb2f37a0c60d15ed07fd3fab9e9b61f;
K562
RCOR1/COREST (ab24166)
None
Signal
IgG-rab
exp
wgEncodeEH002847
GSM935385
379 MB
bigWig
2012-02-27
2012-11-27
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5520; controlId=wgEncodeEH001795; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Corestab24166IggrabSig; md5sum=6f29934b54504d8443eddd265b8ec87e;
K562
RCOR1/COREST (sc30189)
None
Alignments
IgG-rab
exp
wgEncodeEH002814
5.7 MB
bam.bai
2012-01-22
2012-10-21
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5468; controlId=wgEncodeEH001795; md5sum=da2aabd854bc40701469043a55e46150;
K562
RCOR1/COREST (sc30189)
None
Alignments
IgG-rab
exp
wgEncodeEH002814
371 MB
bam
2012-01-22
2012-10-21
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5468; controlId=wgEncodeEH001795; md5sum=e9a786c7ff4cdb6491bd0da2b2bebe7b;
K562
RCOR1/COREST (sc30189)
None
Alignments
IgG-rab
exp
wgEncodeEH002814
5.8 MB
bam.bai
2012-01-22
2012-10-21
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5468; controlId=wgEncodeEH001795; md5sum=2c6bd30a3b358895e92f82a2fff9eed7;
K562
RCOR1/COREST (sc30189)
None
Alignments
IgG-rab
exp
wgEncodeEH002814
434 MB
bam
2012-01-22
2012-10-21
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5468; controlId=wgEncodeEH001795; md5sum=777b551d94a65bf8762cbd8189981b1e;
K562
RCOR1/COREST (sc30189)
None
Peaks
IgG-rab
exp
wgEncodeEH002814
GSM935439
1.9 MB
narrowPeak
2012-01-22
2012-10-21
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5468; controlId=wgEncodeEH001795; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Corestsc30189IggrabPk; md5sum=1efe7c07cb88530f416b34924fde2d3c;
K562
RCOR1/COREST (sc30189)
None
Raw data
IgG-rab
exp
wgEncodeEH002814
GSM935439
797 MB
fastq.tgz
2012-01-22
2012-10-21
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5468; controlId=wgEncodeEH001795; md5sum=dd09b35e5ec67eee586550992469e566;
K562
RCOR1/COREST (sc30189)
None
Raw data
IgG-rab
exp
wgEncodeEH002814
GSM935439
991 MB
fastq.tgz
2012-01-22
2012-10-21
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5468; controlId=wgEncodeEH001795; md5sum=5a3bc47b06efd93b7b4e60109d0bf446;
K562
RCOR1/COREST (sc30189)
None
Signal
IgG-rab
exp
wgEncodeEH002814
GSM935439
329 MB
bigWig
2012-01-22
2012-10-21
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5468; controlId=wgEncodeEH001795; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Corestsc30189IggrabSig; md5sum=58434aa7f6978a9d17e7e279bc4136a1;
K562
CTCF (sc-15914)
None
Alignments
IgG-rab
exp
wgEncodeEH002797
5.8 MB
bam.bai
2011-09-28
2012-06-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=4914; controlId=wgEncodeEH001795; md5sum=252eee1523ad723b0b220c1146d3e802;
K562
CTCF (sc-15914)
None
Alignments
IgG-rab
exp
wgEncodeEH002797
567 MB
bam
2011-09-28
2012-06-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=4914; controlId=wgEncodeEH001795; md5sum=ae37f275fa86b101cd3325a460ef26da;
K562
CTCF (sc-15914)
None
Alignments
IgG-rab
exp
wgEncodeEH002797
5.8 MB
bam.bai
2011-09-28
2012-06-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=4914; controlId=wgEncodeEH001795; md5sum=f292a8551d1d9fe82323a911c26828a6;
K562
CTCF (sc-15914)
None
Alignments
IgG-rab
exp
wgEncodeEH002797
558 MB
bam
2011-09-28
2012-06-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=4914; controlId=wgEncodeEH001795; md5sum=9c5be3e035b833b2ac0d01b79cf276b1;
K562
CTCF (sc-15914)
None
Peaks
IgG-rab
exp
wgEncodeEH002797
GSM935407
1.6 MB
narrowPeak
2011-09-28
2012-06-28
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=4914; controlId=wgEncodeEH001795; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562CtcfbIggrabPk; md5sum=e3fee0039ab77f91306e2853aafa3005;
K562
CTCF (sc-15914)
None
Raw data
IgG-rab
exp
wgEncodeEH002797
GSM935407
1.2 GB
fastq.tgz
2011-09-28
2012-06-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=4914; controlId=wgEncodeEH001795; md5sum=5ede4842d718bf98f7a15ed985c029b9;
K562
CTCF (sc-15914)
None
Raw data
IgG-rab
exp
wgEncodeEH002797
GSM935407
1.2 GB
fastq.tgz
2011-09-28
2012-06-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=4914; controlId=wgEncodeEH001795; md5sum=26100cbb49ac1b09883d8f50683d61ae;
K562
CTCF (sc-15914)
None
Signal
IgG-rab
exp
wgEncodeEH002797
GSM935407
409 MB
bigWig
2011-09-28
2012-06-28
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=4914; controlId=wgEncodeEH001795; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562CtcfbIggrabSig; md5sum=6509b380b70220484f8b6da053779d34;
K562
E2F4 (sc-866)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000671
5.6 MB
bam.bai
2009-06-11
2010-03-11
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1362; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA (replicate 1) or protein A agarose beads (replicate 2), PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=1e2b1f1060815a58a9f0eb0dac2bbdbe;
K562
E2F4 (sc-866)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000671
519 MB
bam
2009-06-11
2010-03-11
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1362; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA (replicate 1) or protein A agarose beads (replicate 2), PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=90ed7b53be9f0b7d6e9450c4de2511a8;
K562
E2F4 (sc-866)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000671
5.5 MB
bam.bai
2009-06-11
2010-03-11
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA (replicate 1) or protein A agarose beads (replicate 2), PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=0c35ba8fd74349615d35fc5377d45c1a;
K562
E2F4 (sc-866)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000671
257 MB
bam
2009-06-11
2010-03-11
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA (replicate 1) or protein A agarose beads (replicate 2), PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=6ecb62750761d18c74504f21be1baf6b;
K562
E2F4 (sc-866)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000671
GSM935600
137 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562E2f4UcdPk; md5sum=45f5d92b80be9bf03731e22373b94415;
K562
E2F4 (sc-866)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000671
GSM935600
199 MB
fastq
2009-06-11
2010-03-11
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=334; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with StaphA (replicate 1) or protein A agarose beads (replicate 2), PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=a121fe69be4fa43ec714b690ac704bef;
K562
E2F4 (sc-866)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000671
GSM935600
424 MB
fastq
2009-06-11
2010-03-11
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=334; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with StaphA (replicate 1) or protein A agarose beads (replicate 2), PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; md5sum=c50266f3b652eabbc21c141257b7b4d5;
K562
E2F4 (sc-866)
None
Signal
UCDavis Input Control
exp
wgEncodeEH000671
GSM935600
274 MB
bigWig
2010-12-02
2011-04-08
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562E2f4UcdSig; md5sum=4f5e2d5aae04f91d603cda5910685b88;
K562
E2F6 (sc-22823)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000676
5.6 MB
bam.bai
2009-06-15
2010-03-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1362; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=f59cc901caa3139853840a71e3fac8b4;
K562
E2F6 (sc-22823)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000676
1.2 GB
bam
2009-06-15
2010-03-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1362; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=a69d9d6fe265873ab3785a767047cff0;
K562
E2F6 (sc-22823)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000676
5.5 MB
bam.bai
2009-06-15
2010-03-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001) Lane A is Illumina 2.0, low confidence sequences excluded; md5sum=e0067aa02934a7d93daed8793affb415;
K562
E2F6 (sc-22823)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000676
571 MB
bam
2009-06-15
2010-03-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001) Lane A is Illumina 2.0, low confidence sequences excluded; md5sum=7e624d121cfea14d7994a48de3d718af;
K562
E2F6 (sc-22823)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000676
GSM935597
271 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562E2f6UcdPk; md5sum=a4e704534e23245c58a832ba1a0b0fba;
K562
E2F6 (sc-22823)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000676
GSM935597
503 MB
fastq
2009-06-15
2010-03-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=371; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with StaphA PeakSeq 1.0 (fdr 0.001) Lane A is Illumina 2.0, low confidence sequences excluded; md5sum=9798741cd0cf895e87a28d2030c0184e;
K562
E2F6 (sc-22823)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000676
GSM935597
1.2 GB
fastq
2009-06-15
2010-03-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=371; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=72dc3a9ce9cbf00af7ccb5629943c4f2;
K562
E2F6 (sc-22823)
None
Signal
UCDavis Input Control
exp
wgEncodeEH000676
GSM935597
265 MB
bigWig
2010-12-02
2011-04-08
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562E2f6UcdSig; md5sum=d34760c355ad4151b7ac810b301a8c62;
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1362; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=1d0005649ade762ef5f2c27a8076f337;
K562
GATA1
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000638
437 MB
bam
2009-02-27
2009-11-27
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1362; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=92eac1a5d2aa6c0bf4b49c132fa1c073;
K562
GATA1
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000638
5.6 MB
bam.bai
2009-02-27
2009-11-27
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=bb233ef6ed12ff20a2c603cd9c3e8bfa;
K562
GATA1
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000638
294 MB
bam
2009-02-27
2009-11-27
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1359; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=b4a2c68e08103da1116ff96817f55bb5;
K562
GATA1
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000638
GSM935540
39 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Gata1UcdPk; md5sum=0e1575e9d786484b0ea7761c0ce167c6;
K562
GATA1
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000638
GSM935540
217 MB
fastq
2009-02-27
2009-11-27
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; subId=227; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=0d4c09997c4b4a9d6defa529cca253cc;
K562
GATA1
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000638
GSM935540
341 MB
fastq
2009-02-27
2009-11-27
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; subId=227; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=8eb5c82c5778a572723ce86425cb433e;
K562
GATA1
None
Signal
UCDavis Input Control
exp
wgEncodeEH000638
GSM935540
280 MB
bigWig
2010-12-02
2011-04-08
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Gata1UcdSig; md5sum=2ac456aa88ad4be89e76a1be46a0c51b;
K562
GATA2
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000683
5.7 MB
bam.bai
2009-09-02
2010-06-02
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1362; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=32d3bf0d4c26308fe62fa14f02baa92d;
K562
GATA2
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000683
719 MB
bam
2009-09-02
2010-06-02
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1362; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=195bdcb676a383f272e8760c9588ecf8;
K562
GATA2
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000683
5.7 MB
bam.bai
2009-09-02
2010-06-02
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=0229751a00aac665646d50ea24c9c854;
K562
GATA2
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000683
672 MB
bam
2009-09-02
2010-06-02
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=83006e3d8d4e38f9e8a92afd099f557c;
K562
GATA2
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000683
GSM935373
122 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Gata2UcdPk; md5sum=d7f7e77f95b44fbe690dfb976de51a5a;
K562
GATA2
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000683
GSM935373
517 MB
fastq
2009-09-02
2010-06-02
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=460; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=0466385322288dd0f1e663828188c369;
K562
GATA2
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000683
GSM935373
550 MB
fastq
2009-09-02
2010-06-02
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=460; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=3fe2825e6560a35e00c6552072d864af;
K562
GATA2
None
Signal
UCDavis Input Control
exp
wgEncodeEH000683
GSM935373
332 MB
bigWig
2010-12-02
2011-04-08
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Gata2UcdSig; md5sum=3eb997e7061343be6b4e54a188fc5b21;
lab=Yale; replicate=2; submittedDataVersion=V2 - Replaced K562/Input used by Snyder and Struhl; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dateResubmitted=2009-06-29; subId=390; controlId=wgEncodeEH000615; labVersion=Illumina 2.0, low confidence sequences excluded; md5sum=081854edfb71f333a034d493de8a1f2e;
K562
Input
None
Raw data
Standard Control
input
wgEncodeEH000615
GSM935363
891 MB
fastq
2009-02-25
2009-11-25
lab=Yale; replicate=1; submittedDataVersion=V2 - Replaced K562/Input used by Snyder and Struhl; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dateResubmitted=2009-06-29; subId=390; controlId=wgEncodeEH000615; md5sum=86a57ac8db19b3c843858349f3261fc0;
K562
Input
None
Signal
IgG-mus
input
wgEncodeEH000726
GSM935631
413 MB
bigWig
2010-12-02
2011-04-08
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000726; tableName=wgEncodeSydhTfbsK562InputIggmusSig; md5sum=abe0ccbcdf4de191fc9b3cf1194856fa;
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=370; controlId=wgEncodeEH000655; md5sum=f3d7c25a7330574e834c11da9bdb469c;
K562
POL2 (MMS-126R)
IFNa30
Signal
Standard Control
exp
wgEncodeEH000660
GSM935475
274 MB
bigWig
2010-12-02
2011-04-08
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000655; tableName=wgEncodeSydhTfbsK562Pol2Ifna30StdSig; md5sum=887fd3a5d52d62b974e3be3544cbfbeb;
K562
POL2 (MMS-126R)
IFNa6h
Alignments
Standard Control
exp
wgEncodeEH000661
5.7 MB
bam.bai
2009-06-09
2010-03-09
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1386; controlId=wgEncodeEH000656; labVersion=remapped from hg18; md5sum=544ffd6407e898f50fbfb378178f5b77;
K562
POL2 (MMS-126R)
IFNa6h
Alignments
Standard Control
exp
wgEncodeEH000661
764 MB
bam
2009-06-09
2010-03-09
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1386; controlId=wgEncodeEH000656; labVersion=remapped from hg18; md5sum=f1176da0d135232793db3617d3104252;
K562
POL2 (MMS-126R)
IFNa6h
Alignments
Standard Control
exp
wgEncodeEH000661
5.6 MB
bam.bai
2009-06-09
2010-03-09
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1375; controlId=wgEncodeEH000656; labVersion=remapped from hg18; md5sum=c0cbae51ec9365fa44c513fd4ee9f0e5;
K562
POL2 (MMS-126R)
IFNa6h
Alignments
Standard Control
exp
wgEncodeEH000661
404 MB
bam
2009-06-09
2010-03-09
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1375; controlId=wgEncodeEH000656; labVersion=remapped from hg18; md5sum=677ce195839dd2290a9ec9accfa33bd9;
K562
POL2 (MMS-126R)
IFNa6h
Peaks
Standard Control
exp
wgEncodeEH000661
GSM935474
190 KB
narrowPeak
2011-06-03
2012-03-03
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000656; tableName=wgEncodeSydhTfbsK562Pol2Ifna6hStdPk; md5sum=12aaf5f1a39afac91f5ca2aba90eb3dd;
K562
POL2 (MMS-126R)
IFNa6h
Raw data
Standard Control
exp
wgEncodeEH000661
GSM935474
314 MB
fastq
2009-06-09
2010-03-09
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=360; controlId=wgEncodeEH000656; md5sum=9a3a08ff64b1c111c26c162ea3248c60;
K562
POL2 (MMS-126R)
IFNa6h
Raw data
Standard Control
exp
wgEncodeEH000661
GSM935474
617 MB
fastq
2009-06-09
2010-03-09
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=360; controlId=wgEncodeEH000656; md5sum=64858984304fa04a903d5482f4de8eac;
K562
POL2 (MMS-126R)
IFNa6h
Signal
Standard Control
exp
wgEncodeEH000661
GSM935474
295 MB
bigWig
2010-12-02
2011-04-08
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000656; tableName=wgEncodeSydhTfbsK562Pol2Ifna6hStdSig; md5sum=d1a90667a60324bd242c793a70e535c0;
K562
POL2 (MMS-126R)
IFNg30
Alignments
Standard Control
exp
wgEncodeEH000704
5.8 MB
bam.bai
2010-01-11
2010-10-11
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1387; controlId=wgEncodeEH000657; labVersion=remapped from hg18; md5sum=a99ee258134e068b720ad3751024d2b2;
K562
POL2 (MMS-126R)
IFNg30
Alignments
Standard Control
exp
wgEncodeEH000704
917 MB
bam
2010-01-11
2010-10-11
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1387; controlId=wgEncodeEH000657; labVersion=remapped from hg18; md5sum=7296ceb733c635db9ff6bcd404b3b44a;
K562
POL2 (MMS-126R)
IFNg30
Alignments
Standard Control
exp
wgEncodeEH000704
5.6 MB
bam.bai
2010-01-11
2010-10-11
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1375; controlId=wgEncodeEH000657; labVersion=remapped from hg18; md5sum=960178fd61cba02031392dda15eba3f5;
K562
POL2 (MMS-126R)
IFNg30
Alignments
Standard Control
exp
wgEncodeEH000704
559 MB
bam
2010-01-11
2010-10-11
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1375; controlId=wgEncodeEH000657; labVersion=remapped from hg18; md5sum=0f947c178fa421a5879d4ecdad437e46;
K562
POL2 (MMS-126R)
IFNg30
Peaks
Standard Control
exp
wgEncodeEH000704
GSM935388
262 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000657; tableName=wgEncodeSydhTfbsK562Pol2Ifng30StdPk; md5sum=0e1e4bcfbc9143d6da9027890b928bf0;
K562
POL2 (MMS-126R)
IFNg30
Raw data
Standard Control
exp
wgEncodeEH000704
GSM935388
416 MB
fastq
2010-01-11
2010-10-11
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=974; controlId=wgEncodeEH000657; md5sum=acaee6463c6f703cc569f192301f160a;
K562
POL2 (MMS-126R)
IFNg30
Raw data
Standard Control
exp
wgEncodeEH000704
GSM935388
731 MB
fastq
2010-01-11
2010-10-11
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=974; controlId=wgEncodeEH000657; md5sum=f430034cb369e3faf8ed7309080d275a;
K562
POL2 (MMS-126R)
IFNg30
Signal
Standard Control
exp
wgEncodeEH000704
GSM935388
346 MB
bigWig
2010-12-02
2011-04-08
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000657; tableName=wgEncodeSydhTfbsK562Pol2Ifng30StdSig; md5sum=8bb641fe367ca0f9275e56c0dce9dcf3;
K562
POL2 (MMS-126R)
IFNg6h
Alignments
Standard Control
exp
wgEncodeEH000662
5.7 MB
bam.bai
2009-06-09
2010-03-09
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1387; controlId=wgEncodeEH000658; labVersion=remapped from hg18; md5sum=fbbfb37e61cba61e5769ede6de4801e3;
K562
POL2 (MMS-126R)
IFNg6h
Alignments
Standard Control
exp
wgEncodeEH000662
700 MB
bam
2009-06-09
2010-03-09
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1387; controlId=wgEncodeEH000658; labVersion=remapped from hg18; md5sum=2c0c1d70895d5768955a8d3f319c2732;
K562
POL2 (MMS-126R)
IFNg6h
Alignments
Standard Control
exp
wgEncodeEH000662
5.6 MB
bam.bai
2009-06-09
2010-03-09
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1376; controlId=wgEncodeEH000658; labVersion=remapped from hg18; md5sum=ec88ca12964ff9c25234662730339668;
K562
POL2 (MMS-126R)
IFNg6h
Alignments
Standard Control
exp
wgEncodeEH000662
394 MB
bam
2009-06-09
2010-03-09
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1376; controlId=wgEncodeEH000658; labVersion=remapped from hg18; md5sum=26f2537ace952880d08b9bbf6be490d8;
K562
POL2 (MMS-126R)
IFNg6h
Peaks
Standard Control
exp
wgEncodeEH000662
GSM935473
250 KB
narrowPeak
2011-06-03
2012-03-03
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000658; tableName=wgEncodeSydhTfbsK562Pol2Ifng6hStdPk; md5sum=8d7e4dc4e4c06518eba48533e260b289;
K562
POL2 (MMS-126R)
IFNg6h
Raw data
Standard Control
exp
wgEncodeEH000662
GSM935473
287 MB
fastq
2009-06-09
2010-03-09
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=359; controlId=wgEncodeEH000658; md5sum=47eeae5414202e45fcdbe89fc599ebe4;
K562
POL2 (MMS-126R)
IFNg6h
Raw data
Standard Control
exp
wgEncodeEH000662
GSM935473
573 MB
fastq
2009-06-09
2010-03-09
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=359; controlId=wgEncodeEH000658; md5sum=ec10e7c29f6ee6f6a720e4d9fc133e8a;
K562
POL2 (MMS-126R)
IFNg6h
Signal
Standard Control
exp
wgEncodeEH000662
GSM935473
317 MB
bigWig
2010-12-02
2011-04-08
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000658; tableName=wgEncodeSydhTfbsK562Pol2Ifng6hStdSig; md5sum=33bdbc45bc5e954f44faefb097f937a5;
K562
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000727
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1388; controlId=wgEncodeEH000726; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=9e5247b37660902ff5587dcd2dabbd08;
K562
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000727
686 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1388; controlId=wgEncodeEH000726; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=b5ac38c666ec74ef91c8d1c8f14aff9f;
K562
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000727
5.7 MB
bam.bai
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1376; controlId=wgEncodeEH000726; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=eb05a2468e8bca345cdcab0a6e18f8ea;
K562
POL2 (MMS-126R)
None
Alignments
IgG-mus
exp
wgEncodeEH000727
631 MB
bam
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1376; controlId=wgEncodeEH000726; labVersion=remapped from hg18, Data paired with IgG_Control.; md5sum=32f6540534a99567d1e1f39b19563d43;
K562
POL2 (MMS-126R)
None
Alignments
Standard Control
exp
wgEncodeEH000616
5.6 MB
bam.bai
2008-10-31
2009-07-31
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1388; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=574e13420b3a234f02fd711c2a84962a;
K562
POL2 (MMS-126R)
None
Alignments
Standard Control
exp
wgEncodeEH000616
329 MB
bam
2008-10-31
2009-07-31
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1388; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=719a43b38965fa74b8e6325f7dd6b214;
K562
POL2 (MMS-126R)
None
Alignments
Standard Control
exp
wgEncodeEH000616
5.6 MB
bam.bai
2008-10-31
2009-07-31
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1376; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=42080887a1543c77aca3218bbf2d40fa;
K562
POL2 (MMS-126R)
None
Alignments
Standard Control
exp
wgEncodeEH000616
310 MB
bam
2008-10-31
2009-07-31
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1376; controlId=wgEncodeEH000615; labVersion=remapped from hg18; md5sum=646fb37d23ddb941fda0834fae292c6a;
K562
POL2 (MMS-126R)
None
Peaks
IgG-mus
exp
wgEncodeEH000727
GSM935632
110 KB
narrowPeak
2011-06-03
2012-03-03
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000726; tableName=wgEncodeSydhTfbsK562Pol2IggmusPk; md5sum=e878710ad764502ef990eeff2524a04a;
K562
POL2 (MMS-126R)
None
Peaks
Standard Control
exp
wgEncodeEH000616
GSM935358
272 KB
narrowPeak
2011-06-03
2012-03-03
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Pol2StdPk; md5sum=41d68a9c6796b020e88d2adcf9be1ba3;
K562
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000727
GSM935632
482 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=895; controlId=wgEncodeEH000726; labVersion=Data paired with IgG_Control.; md5sum=cf1119371807c0eb9add16373a637d9f;
K562
POL2 (MMS-126R)
None
Raw data
IgG-mus
exp
wgEncodeEH000727
GSM935632
526 MB
fastq
2010-01-12
2010-10-12
lab=Stanford; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=895; controlId=wgEncodeEH000726; labVersion=Data paired with IgG_Control.; md5sum=dc7255a29ff2a38a6d9bafd6c858d71e;
K562
POL2 (MMS-126R)
None
Raw data
Standard Control
exp
wgEncodeEH000616
GSM935358
251 MB
fastq
2008-10-31
2009-07-31
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; subId=16; controlId=wgEncodeEH000615; md5sum=839c9bbc3f7693e6e07a70a94875390c;
K562
POL2 (MMS-126R)
None
Raw data
Standard Control
exp
wgEncodeEH000616
GSM935358
273 MB
fastq
2008-10-31
2009-07-31
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; subId=16; controlId=wgEncodeEH000615; md5sum=6a6755d5f9a2c28a959a3d592128f707;
K562
POL2 (MMS-126R)
None
Signal
IgG-mus
exp
wgEncodeEH000727
GSM935632
332 MB
bigWig
2010-12-02
2011-04-08
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000726; tableName=wgEncodeSydhTfbsK562Pol2IggmusSig; md5sum=827b59c5dfc3aaf3ad912b89060748e8;
K562
POL2 (MMS-126R)
None
Signal
Standard Control
exp
wgEncodeEH000616
GSM935358
288 MB
bigWig
2010-12-02
2011-04-08
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Pol2StdSig; md5sum=86e02c859d476b4fdc69d6ddf4d014ce;
K562
POL2 (phospho S2) (ab5095)
None
Alignments
IgG-rab
exp
wgEncodeEH002833
5.8 MB
bam.bai
2012-02-04
2012-11-03
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5522; controlId=wgEncodeEH001795; md5sum=8111067c032d9d7e0a178296fc075a46;
K562
POL2 (phospho S2) (ab5095)
None
Alignments
IgG-rab
exp
wgEncodeEH002833
507 MB
bam
2012-02-04
2012-11-03
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5522; controlId=wgEncodeEH001795; md5sum=c6782813723963b7ea1d0f9eb0375b97;
K562
POL2 (phospho S2) (ab5095)
None
Alignments
IgG-rab
exp
wgEncodeEH002833
5.8 MB
bam.bai
2012-02-04
2012-11-03
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5522; controlId=wgEncodeEH001795; md5sum=cbfa3cecdbbe9647f65d7ab7fdf4386a;
K562
POL2 (phospho S2) (ab5095)
None
Alignments
IgG-rab
exp
wgEncodeEH002833
557 MB
bam
2012-02-04
2012-11-03
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5522; controlId=wgEncodeEH001795; md5sum=eb7dfd9cfce147b2134efb217e8e235d;
lab=Stanford; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Pol3StdSig; md5sum=b27a37aba97933f74da7c6f52c8a4535;
K562
RFX5 (200-401-194)
None
Alignments
IgG-rab
exp
wgEncodeEH002033
5.9 MB
bam.bai
2011-06-30
2012-03-30
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4460; controlId=wgEncodeEH001795; md5sum=7a89f8395f2b9151c839af95a0f6d07a;
K562
RFX5 (200-401-194)
None
Alignments
IgG-rab
exp
wgEncodeEH002033
541 MB
bam
2011-06-30
2012-03-30
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4460; controlId=wgEncodeEH001795; md5sum=0d2a07f30aaec2c8159b4f3e480d350e;
K562
RFX5 (200-401-194)
None
Alignments
IgG-rab
exp
wgEncodeEH002033
5.8 MB
bam.bai
2011-06-30
2012-03-30
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4460; controlId=wgEncodeEH001795; md5sum=5f1b1351cffbb9ac997b5bcf7920a44a;
K562
RFX5 (200-401-194)
None
Alignments
IgG-rab
exp
wgEncodeEH002033
432 MB
bam
2011-06-30
2012-03-30
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4460; controlId=wgEncodeEH001795; md5sum=67953e12b1fc038c413911229fb79c90;
K562
RFX5 (200-401-194)
None
Peaks
IgG-rab
exp
wgEncodeEH002033
GSM935565
676 KB
narrowPeak
2011-06-30
2012-03-30
lab=Stanford; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4460; controlId=wgEncodeEH001795; labVersion=PeakSeq1.0. Although this dataset narrowly misses the ENCODE cut-off for peak agreement between replicates, the exceptionally strong signals observed at the HLA loci on chromosome 6 indicate that this is a high-quality dataset.; tableName=wgEncodeSydhTfbsK562Rfx5IggrabPk; md5sum=ae84b26b09857dfc02444fcf70734f7e;
K562
RFX5 (200-401-194)
None
Raw data
IgG-rab
exp
wgEncodeEH002033
GSM935565
998 MB
fastq.tgz
2011-06-30
2012-03-30
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4460; controlId=wgEncodeEH001795; md5sum=51f91e010832926249b293dfae15e0ec;
K562
RFX5 (200-401-194)
None
Raw data
IgG-rab
exp
wgEncodeEH002033
GSM935565
1.5 GB
fastq.tgz
2011-06-30
2012-03-30
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4460; controlId=wgEncodeEH001795; md5sum=7e40c76e38e500b13ba728722aa6066d;
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1343; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=483e2c9a5a8d50eb4ecd86b1ddcd8359;
K562
RPC155 (1900)
None
Alignments
Standard Control
exp
wgEncodeEH000680
363 MB
bam
2009-06-22
2010-03-22
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1343; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=563c84370e36c6055c3001cc55d208cb;
K562
RPC155 (1900)
None
Alignments
Standard Control
exp
wgEncodeEH000680
5.5 MB
bam.bai
2009-06-22
2010-03-22
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1341; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=345ca359c00ee4a161d93578ef808549;
K562
RPC155 (1900)
None
Alignments
Standard Control
exp
wgEncodeEH000680
340 MB
bam
2009-06-22
2010-03-22
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-14; subId=1341; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=301cc708041b6fee15716493045c9573;
K562
RPC155 (1900)
None
Peaks
Standard Control
exp
wgEncodeEH000680
GSM935372
19 KB
narrowPeak
2011-06-03
2012-03-03
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Rpc155StdPk; md5sum=c5b18252c20c6aebc467656680c51d20;
K562
RPC155 (1900)
None
Raw data
Standard Control
exp
wgEncodeEH000680
GSM935372
280 MB
fastq
2009-06-22
2010-03-22
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=385; controlId=wgEncodeEH000615; labVersion=Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=630fa527c58ea892f1fd61b0e660c3b3;
K562
RPC155 (1900)
None
Raw data
Standard Control
exp
wgEncodeEH000680
GSM935372
281 MB
fastq
2009-06-22
2010-03-22
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=385; controlId=wgEncodeEH000615; labVersion=Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=e77e076ee9018830c98d0f932580de41;
K562
RPC155 (1900)
None
Signal
Standard Control
exp
wgEncodeEH000680
GSM935372
283 MB
bigWig
2010-12-02
2011-04-08
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Rpc155StdSig; md5sum=fcba3b130a9c71fa995f0d2728c33b00;
K562
RAD21 (ab992)
None
Alignments
Standard Control
exp
wgEncodeEH000649
5.7 MB
bam.bai
2009-05-05
2010-02-04
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1388; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Contains incomplete fastq files; md5sum=544f991f47f4151d1255b7bc8052f1a0;
K562
RAD21 (ab992)
None
Alignments
Standard Control
exp
wgEncodeEH000649
430 MB
bam
2009-05-05
2010-02-04
lab=Yale; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1388; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Contains incomplete fastq files; md5sum=7f5c811793a97f48564b77337c815993;
K562
RAD21 (ab992)
None
Alignments
Standard Control
exp
wgEncodeEH000649
5.7 MB
bam.bai
2009-05-05
2010-02-04
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1377; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Contains incomplete fastq files; md5sum=2916255b96fb82f938f5e76c68446618;
K562
RAD21 (ab992)
None
Alignments
Standard Control
exp
wgEncodeEH000649
444 MB
bam
2009-05-05
2010-02-04
lab=Yale; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1377; controlId=wgEncodeEH000615; labVersion=remapped from hg18, Contains incomplete fastq files; md5sum=94c1159522885c017235571890cc342c;
K562
RAD21 (ab992)
None
Peaks
Standard Control
exp
wgEncodeEH000649
GSM935319
258 KB
narrowPeak
2011-06-03
2012-03-03
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Rad21StdPk; md5sum=31e26aa8be8f75f6f0ebfbc12e2a904f;
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Rad21StdSig; md5sum=1b4ca781ee370e3c899ba9ea38e0fdb8;
K562
SETDB1 (11231-1-AP)
Micrococcal nuclease
Alignments
UCDavis Input Control
exp
wgEncodeEH000769
5.8 MB
bam.bai
2010-01-16
2010-10-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using MNase and used proteinA agarose beads for ChIPs, PeakSeq 1.0 (fdr 0.001); md5sum=692e5f36ad6a2c94cc0d6c54d48611ae;
K562
SETDB1 (11231-1-AP)
Micrococcal nuclease
Alignments
UCDavis Input Control
exp
wgEncodeEH000769
791 MB
bam
2010-01-16
2010-10-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using MNase and used proteinA agarose beads for ChIPs, PeakSeq 1.0 (fdr 0.001); md5sum=de153f0652491963bfd7bbcb4084fec7;
K562
SETDB1 (11231-1-AP)
Micrococcal nuclease
Alignments
UCDavis Input Control
exp
wgEncodeEH000769
5.8 MB
bam.bai
2010-01-16
2010-10-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using MNase and used proteinA agarose beads for ChIPs, PeakSeq 1.0 (fdr 0.001); md5sum=5ba4f7705ea48b0a806188cdd7c972b8;
K562
SETDB1 (11231-1-AP)
Micrococcal nuclease
Alignments
UCDavis Input Control
exp
wgEncodeEH000769
701 MB
bam
2010-01-16
2010-10-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using MNase and used proteinA agarose beads for ChIPs, PeakSeq 1.0 (fdr 0.001); md5sum=f6af117cd3a31533b2f3e663a038ef52;
K562
SETDB1 (11231-1-AP)
Micrococcal nuclease
Peaks
UCDavis Input Control
exp
wgEncodeEH000769
GSM935573
28 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Setdb1MnasedUcdPk; md5sum=74ed6582b9df786ac592b77a0b22cf1d;
K562
SETDB1 (11231-1-AP)
Micrococcal nuclease
Raw data
UCDavis Input Control
exp
wgEncodeEH000769
GSM935573
514 MB
fastq
2010-01-16
2010-10-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1088; controlId=wgEncodeEH000672; labVersion=Fragmented using MNase and used proteinA agarose beads for ChIPs,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=186b16c6759852eeccbe0ebefe8db856;
K562
SETDB1 (11231-1-AP)
Micrococcal nuclease
Raw data
UCDavis Input Control
exp
wgEncodeEH000769
GSM935573
589 MB
fastq
2010-01-16
2010-10-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1088; controlId=wgEncodeEH000672; labVersion=Fragmented using MNase and used proteinA agarose beads for ChIPs,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=bb37596bcf734e679432d00c7288f220;
K562
SETDB1 (11231-1-AP)
Micrococcal nuclease
Signal
UCDavis Input Control
exp
wgEncodeEH000769
GSM935573
391 MB
bigWig
2010-12-02
2011-04-08
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Setdb1MnasedUcdSig; md5sum=8bc88b0248b4b09bd70f78003967b6c7;
K562
SETDB1 (11231-1-AP)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000677
5.7 MB
bam.bai
2009-06-15
2010-03-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=2cbb9f398df4597d14e9605fac02d4c4;
K562
SETDB1 (11231-1-AP)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000677
778 MB
bam
2009-06-15
2010-03-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=deaa992468195b8ac836a78c12adf363;
K562
SETDB1 (11231-1-AP)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000677
5.8 MB
bam.bai
2009-06-15
2010-03-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=fd6fbb7d154ec5908fd91975b478f81f;
K562
SETDB1 (11231-1-AP)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000677
1.3 GB
bam
2009-06-15
2010-03-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=68ce8200ab5d57def7fbe800648d5970;
K562
SETDB1 (11231-1-AP)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000677
GSM935598
58 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Setdb1UcdPk; md5sum=53b97f9d370e39582467b6d40f7512e7;
K562
SETDB1 (11231-1-AP)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000677
GSM935598
655 MB
fastq
2009-06-15
2010-03-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=377; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=738a51681d76ac941299c275fcfc91a7;
K562
SETDB1 (11231-1-AP)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000677
GSM935598
1.2 GB
fastq
2009-06-15
2010-03-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=377; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=dadbed28aa7fcf1e4896344fa4e2b6f8;
K562
SETDB1 (11231-1-AP)
None
Signal
UCDavis Input Control
exp
wgEncodeEH000677
GSM935598
322 MB
bigWig
2010-12-02
2011-04-08
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Setdb1UcdSig; md5sum=61ad54a0eb0844822cef5e416848d24e;
K562
SIRT6 (ab48192)
None
Alignments
Standard Control
exp
wgEncodeEH000681
5.7 MB
bam.bai
2009-06-22
2010-03-22
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1344; controlId=wgEncodeEH000615; labVersion=remapped from hg18, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=d04eb2ed5f81f159c8349f1b2f9817e6;
K562
SIRT6 (ab48192)
None
Alignments
Standard Control
exp
wgEncodeEH000681
812 MB
bam
2009-06-22
2010-03-22
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1344; controlId=wgEncodeEH000615; labVersion=remapped from hg18, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=19b5db27dc65d827df791f5268d62140;
K562
SIRT6 (ab48192)
None
Alignments
Standard Control
exp
wgEncodeEH000681
5.7 MB
bam.bai
2009-06-22
2010-03-22
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1341; controlId=wgEncodeEH000615; labVersion=remapped from hg18, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=d0b1ab5c9f8bdad36310e0f20877f4aa;
K562
SIRT6 (ab48192)
None
Alignments
Standard Control
exp
wgEncodeEH000681
847 MB
bam
2009-06-22
2010-03-22
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1341; controlId=wgEncodeEH000615; labVersion=remapped from hg18, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=f89edea95e1d8af854421e90b6842d7a;
K562
SIRT6 (ab48192)
None
Peaks
Standard Control
exp
wgEncodeEH000681
GSM935371
11 KB
narrowPeak
2011-06-03
2012-03-03
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Sirt6StdPk; md5sum=4b8fa5ee502da30b76a77d4a727c3bc9;
K562
SIRT6 (ab48192)
None
Raw data
Standard Control
exp
wgEncodeEH000681
GSM935371
664 MB
fastq
2009-06-22
2010-03-22
lab=Harvard; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=386; controlId=wgEncodeEH000615; labVersion=fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=61d830fa023f177819458534ad23fb26;
K562
SIRT6 (ab48192)
None
Raw data
Standard Control
exp
wgEncodeEH000681
GSM935371
699 MB
fastq
2009-06-22
2010-03-22
lab=Harvard; replicate=1; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=386; controlId=wgEncodeEH000615; labVersion=fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; md5sum=bba6e95a018d2007131ad94b955d38d0;
K562
SIRT6 (ab48192)
None
Signal
Standard Control
exp
wgEncodeEH000681
GSM935371
363 MB
bigWig
2010-12-02
2011-04-08
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Sirt6StdSig; md5sum=36761ef5b27aa91da8a5c475699f8b7f;
K562
SMC3 (ab9263)
None
Alignments
IgG-rab
exp
wgEncodeEH001845
5.6 MB
bam.bai
2011-01-18
2011-10-18
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3324; controlId=wgEncodeEH001795; md5sum=006917a4b120b979483b4d31a9747978;
K562
SMC3 (ab9263)
None
Alignments
IgG-rab
exp
wgEncodeEH001845
266 MB
bam
2011-01-18
2011-10-18
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3324; controlId=wgEncodeEH001795; md5sum=8bca40db86927fffdbf149c369d83065;
K562
SMC3 (ab9263)
None
Alignments
IgG-rab
exp
wgEncodeEH001845
5.6 MB
bam.bai
2011-01-18
2011-10-18
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3324; controlId=wgEncodeEH001795; md5sum=36501d06d4ffb43453394d2b52876b95;
K562
SMC3 (ab9263)
None
Alignments
IgG-rab
exp
wgEncodeEH001845
219 MB
bam
2011-01-18
2011-10-18
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3324; controlId=wgEncodeEH001795; md5sum=6d60a3ee75f878f24d4b94e59706822a;
lab=Harvard; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Tf3c110StdSig; md5sum=5404e1530a6972064128e6b1f567581f;
K562
TR4
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000682
5.7 MB
bam.bai
2009-06-22
2010-03-22
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=68222c828470a441a4c07b81928fbdf9;
K562
TR4
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000682
593 MB
bam
2009-06-22
2010-03-22
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=43cfb5dcddf113bf18d4d40eb036e95f;
K562
TR4
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000682
5.7 MB
bam.bai
2009-06-22
2010-03-22
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=2540ef47d39ada501552cb93b5ba6b42;
K562
TR4
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000682
468 MB
bam
2009-06-22
2010-03-22
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001); md5sum=4392262c7850b2b8ab020782f78a1aec;
K562
TR4
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000682
GSM935374
9.1 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Tr4UcdPk; md5sum=d77f4e16aa46dd3955b05e97b773c8d5;
K562
TR4
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000682
GSM935374
360 MB
fastq
2009-06-22
2010-03-22
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=380; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=6c3f75ff2dbf173f64a5ee9f8efd5aa0;
K562
TR4
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000682
GSM935374
465 MB
fastq
2009-06-22
2010-03-22
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; subId=380; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=8d9de23593dee93a54874668428a7f37;
K562
TR4
None
Signal
UCDavis Input Control
exp
wgEncodeEH000682
GSM935374
315 MB
bigWig
2010-12-02
2011-04-08
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Tr4UcdSig; md5sum=35f7060dede50924224d03691574ae2d;
K562
UBF (sc-13125)
None
Alignments
IgG-mus
exp
wgEncodeEH002863
5.8 MB
bam.bai
2012-02-28
2012-11-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5525; controlId=wgEncodeEH000726; md5sum=450c4b93bd32eab6f6ff3414d54e6749;
K562
UBF (sc-13125)
None
Alignments
IgG-mus
exp
wgEncodeEH002863
365 MB
bam
2012-02-28
2012-11-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5525; controlId=wgEncodeEH000726; md5sum=0053aad345ecf371d9e0206c061ceceb;
K562
UBF (sc-13125)
None
Alignments
IgG-mus
exp
wgEncodeEH002863
5.8 MB
bam.bai
2012-02-28
2012-11-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5525; controlId=wgEncodeEH000726; md5sum=61aba07e7d488b356eff0ca009a04fe9;
K562
UBF (sc-13125)
None
Alignments
IgG-mus
exp
wgEncodeEH002863
426 MB
bam
2012-02-28
2012-11-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5525; controlId=wgEncodeEH000726; md5sum=222978ae5e4461ad9e9137a99637ba82;
K562
UBF (sc-13125)
None
Peaks
IgG-mus
exp
wgEncodeEH002863
GSM935338
621 KB
narrowPeak
2012-02-28
2012-11-28
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5525; controlId=wgEncodeEH000726; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Ubfsc13125IggmusPk; md5sum=ca98f991de776737876fa7ed62528aaf;
K562
UBF (sc-13125)
None
Raw data
IgG-mus
exp
wgEncodeEH002863
GSM935338
987 MB
fastq.tgz
2012-02-28
2012-11-28
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5525; controlId=wgEncodeEH000726; md5sum=574c053756cd397d98f34de16bc94579;
K562
UBF (sc-13125)
None
Raw data
IgG-mus
exp
wgEncodeEH002863
GSM935338
999 MB
fastq.tgz
2012-02-28
2012-11-28
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5525; controlId=wgEncodeEH000726; md5sum=c3b8f6d7191ec1e9178bf272c01a928a;
K562
UBF (sc-13125)
None
Signal
IgG-mus
exp
wgEncodeEH002863
GSM935338
296 MB
bigWig
2012-02-28
2012-11-28
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5525; controlId=wgEncodeEH000726; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Ubfsc13125IggmusSig; md5sum=b7d17806fe61541160518845ad150b05;
K562
UBTF (SAB1404509)
None
Alignments
IgG-mus
exp
wgEncodeEH002850
5.7 MB
bam.bai
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5526; controlId=wgEncodeEH000726; md5sum=beb84494d0c1c8edc9f9c05d342c4719;
K562
UBTF (SAB1404509)
None
Alignments
IgG-mus
exp
wgEncodeEH002850
326 MB
bam
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5526; controlId=wgEncodeEH000726; md5sum=5ff1973455fe5201a34f49f0cd145f73;
K562
UBTF (SAB1404509)
None
Alignments
IgG-mus
exp
wgEncodeEH002850
5.8 MB
bam.bai
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5526; controlId=wgEncodeEH000726; md5sum=a83631c6b5dc053938ab57b2ae8f1750;
K562
UBTF (SAB1404509)
None
Alignments
IgG-mus
exp
wgEncodeEH002850
422 MB
bam
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5526; controlId=wgEncodeEH000726; md5sum=553365e6ddd90efb636464540901cd6c;
K562
UBTF (SAB1404509)
None
Peaks
IgG-mus
exp
wgEncodeEH002850
GSM935642
884 KB
narrowPeak
2012-02-27
2012-11-27
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5526; controlId=wgEncodeEH000726; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Ubtfsab1404509IggmusPk; md5sum=a5cc3f9197a9d86b96881b76f6d8a663;
K562
UBTF (SAB1404509)
None
Raw data
IgG-mus
exp
wgEncodeEH002850
GSM935642
1.0 GB
fastq.tgz
2012-02-27
2012-11-27
lab=Stanford; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5526; controlId=wgEncodeEH000726; md5sum=6bd61abac2604feb065df51692129cad;
K562
UBTF (SAB1404509)
None
Raw data
IgG-mus
exp
wgEncodeEH002850
GSM935642
1.1 GB
fastq.tgz
2012-02-27
2012-11-27
lab=Stanford; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5526; controlId=wgEncodeEH000726; md5sum=600d8da2da7aefb30e2980c48f0eae1e;
K562
UBTF (SAB1404509)
None
Signal
IgG-mus
exp
wgEncodeEH002850
GSM935642
281 MB
bigWig
2012-02-27
2012-11-27
lab=Stanford; dataVersion=ENCODE Mar 2012 Freeze; subId=5526; controlId=wgEncodeEH000726; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsK562Ubtfsab1404509IggmusSig; md5sum=92d3d32965b51a158e43e416fac6be95;
K562
USF2 (ab60931)
None
Alignments
IgG-rab
exp
wgEncodeEH001797
5.7 MB
bam.bai
2010-04-27
2011-01-27
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1146; controlId=wgEncodeEH001795; md5sum=4a444b7c92566ac061725b1f5ce48974;
K562
USF2 (ab60931)
None
Alignments
IgG-rab
exp
wgEncodeEH001797
342 MB
bam
2010-04-27
2011-01-27
lab=Stanford; replicate=2; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1146; controlId=wgEncodeEH001795; md5sum=6926eb846aaa2ba516c0e0f8f36d07d2;
K562
USF2 (ab60931)
None
Alignments
IgG-rab
exp
wgEncodeEH001797
5.7 MB
bam.bai
2010-04-27
2011-01-27
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1146; controlId=wgEncodeEH001795; md5sum=8e2867a83bc22d1c78b5cf5d3364ec52;
K562
USF2 (ab60931)
None
Alignments
IgG-rab
exp
wgEncodeEH001797
345 MB
bam
2010-04-27
2011-01-27
lab=Stanford; replicate=1; origAssembly=hg19; dataVersion=ENCODE June 2010 Freeze; subId=1146; controlId=wgEncodeEH001795; md5sum=f34cd9ef1a612d0f3d688643270ebb39;
lab=Yale; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000615; tableName=wgEncodeSydhTfbsK562Xrcc4StdSig; md5sum=0a611e268dcacebe512fef00439427ca;
K562
YY1 (sc-1703)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000684
5.7 MB
bam.bai
2009-09-03
2010-06-03
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein G magnetic beads, PeakSeq 1.0 (fdr 0.001); md5sum=4d3f85acffedb087993e578d0645ff1b;
K562
YY1 (sc-1703)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000684
582 MB
bam
2009-09-03
2010-06-03
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein G magnetic beads, PeakSeq 1.0 (fdr 0.001); md5sum=bf0009aa1cb277412ecaa1b84dc60758;
K562
YY1 (sc-1703)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000684
5.7 MB
bam.bai
2009-09-03
2010-06-03
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein G magnetic beads, PeakSeq 1.0 (fdr 0.001); md5sum=a14155576210c17b0663ac02364b31f4;
K562
YY1 (sc-1703)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000684
613 MB
bam
2009-09-03
2010-06-03
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with protein G magnetic beads, PeakSeq 1.0 (fdr 0.001); md5sum=9702f59bd9f872105fabb16bc6a058dd;
K562
YY1 (sc-1703)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000684
GSM935368
74 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Yy1UcdPk; md5sum=ef2a46485852ced4e03750fda5db807e;
K562
YY1 (sc-1703)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000684
GSM935368
457 MB
fastq
2009-09-03
2010-06-03
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=467; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with protein G magnetic beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=5fc336059c08b7b6de7e8c92ff207ec7;
K562
YY1 (sc-1703)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000684
GSM935368
494 MB
fastq
2009-09-03
2010-06-03
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=467; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with protein G magnetic beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=347902ae6684d452b633b42e910e5753;
K562
YY1 (sc-1703)
None
Signal
UCDavis Input Control
exp
wgEncodeEH000684
GSM935368
377 MB
bigWig
2010-12-02
2011-04-08
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Yy1UcdSig; md5sum=95ba0b84c89f95f0adabdc16ad5c7015;
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=7e18ac8b60491ace00d0eb33912cdf4d;
K562
ZNF263 (H00010127-A01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000630
292 MB
bam
2009-02-25
2009-11-25
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=e836335b1c73bc73bdb58a6a2e942d91;
K562
ZNF263 (H00010127-A01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000630
5.6 MB
bam.bai
2009-02-25
2009-11-25
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=56b30c340eea38e9341d17a8fc5ff865;
K562
ZNF263 (H00010127-A01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000630
291 MB
bam
2009-02-25
2009-11-25
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=f5fdb8889067ede39d7016c89c34aeed;
K562
ZNF263 (H00010127-A01)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000630
GSM935532
46 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Znf263UcdPk; md5sum=de9000f06a3f75322cd7456ef370fb0e;
K562
ZNF263 (H00010127-A01)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000630
GSM935532
227 MB
fastq
2009-02-25
2009-11-25
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; subId=205; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=91e86905c665958ac087696d8ec70e5f;
K562
ZNF263 (H00010127-A01)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000630
GSM935532
227 MB
fastq
2009-02-25
2009-11-25
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; subId=205; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=1a4539a3dba95c9d3f711050c241a5ef;
K562
ZNF263 (H00010127-A01)
None
Signal
UCDavis Input Control
exp
wgEncodeEH000630
GSM935532
289 MB
bigWig
2010-12-02
2011-04-08
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Znf263UcdSig; md5sum=6fe8d0098bb3a359b5fc8ea9c2f5c8b5;
K562
ZNF274 (H00010782-A01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000696
5.8 MB
bam.bai
2010-01-05
2010-10-04
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=5798da4de2280f04553ee09c58e6b685;
K562
ZNF274 (H00010782-A01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000696
1.6 GB
bam
2010-01-05
2010-10-04
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=3696b30baaf0f782fa7558880ce75378;
K562
ZNF274 (H00010782-A01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000696
5.7 MB
bam.bai
2010-01-05
2010-10-04
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=a82410e80d3f2bac9ceb8711e1276829;
K562
ZNF274 (H00010782-A01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000696
927 MB
bam
2010-01-05
2010-10-04
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000672; labVersion=remapped from hg18, Fragmented using Bioruptor, precipitated with StaphA, PeakSeq 1.0 (fdr 0.001); md5sum=310b0f930469fdd5d8a8fbddf64ebe73;
K562
ZNF274 (H00010782-A01)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000696
GSM935479
6.8 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Znf274UcdPk; md5sum=486d091c324ba33cf3e46740180ccdf7;
K562
ZNF274 (H00010782-A01)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000696
GSM935479
798 MB
fastq
2010-01-05
2010-10-04
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=860; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=91d4d000285c36b4181a18be68e43648;
K562
ZNF274 (H00010782-A01)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000696
GSM935479
1.4 GB
fastq
2010-01-05
2010-10-04
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=860; controlId=wgEncodeEH000672; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=fe865fa0e8402fd848f42ac0ded22924;
K562
ZNF274 (H00010782-A01)
None
Signal
UCDavis Input Control
exp
wgEncodeEH000696
GSM935479
363 MB
bigWig
2010-12-02
2011-04-08
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000672; tableName=wgEncodeSydhTfbsK562Znf274UcdSig; md5sum=57d54a89d49fdeb9a1bbd964b000bb3e;
K562
ZNF274 (H00010782-M01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002068
5.8 MB
bam.bai
2011-09-14
2012-06-14
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4462; controlId=wgEncodeEH000672; md5sum=cd12f07aec26644e1bb5d42f476c71d2;
K562
ZNF274 (H00010782-M01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002068
415 MB
bam
2011-09-14
2012-06-14
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4462; controlId=wgEncodeEH000672; md5sum=3014134dc01dc23a88bb1133f6fd2181;
K562
ZNF274 (H00010782-M01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002068
5.9 MB
bam.bai
2011-09-14
2012-06-14
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4462; controlId=wgEncodeEH000672; md5sum=76fbe38c822560c81d1383d928599991;
K562
ZNF274 (H00010782-M01)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002068
596 MB
bam
2011-09-14
2012-06-14
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4462; controlId=wgEncodeEH000672; md5sum=2f62f1772d67a0e4940c1160c179b944;
K562
ZNF274 (H00010782-M01)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH002068
GSM935503
127 KB
narrowPeak
2011-09-14
2012-06-14
lab=USC; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4462; controlId=wgEncodeEH000672; labVersion=PeakSeq1.0. This factor has a limited number of highly enriched target sites and for factors with so few binding sites, we believe that in order to get a good overlap between replicate datasets one must have fewer reads. We are confident with the overlap of the highly enriched binding sites for this dataset regardless of the poor replicate overlap.; tableName=wgEncodeSydhTfbsK562Znf274m01UcdPk; md5sum=72c40b7f43274ade845df679cb3679b3;
K562
ZNF274 (H00010782-M01)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH002068
GSM935503
1.4 GB
fastq.tgz
2011-09-14
2012-06-14
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4462; controlId=wgEncodeEH000672; md5sum=1dd68fe4451ebc8803bceff9631a0573;
K562
ZNF274 (H00010782-M01)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH002068
GSM935503
1.5 GB
fastq.tgz
2011-09-14
2012-06-14
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4462; controlId=wgEncodeEH000672; md5sum=e1c285d1f0293a08897001783f84ac5a;
lab=USC; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5254; controlId=wgEncodeEH000762; md5sum=2743085c6c6f9366e74e6d4d2be0dc43;
MCF-7
GATA3 (sc-269)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002812
945 MB
bam
2011-12-18
2012-09-18
lab=USC; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5254; controlId=wgEncodeEH000762; md5sum=d07f215008868444d2ecc83a36d4ef39;
MCF-7
GATA3 (sc-269)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002812
5.5 MB
bam.bai
2011-12-18
2012-09-18
lab=USC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5254; controlId=wgEncodeEH000762; md5sum=06fde9fa2f1162eebf8275db6a4e2e93;
MCF-7
GATA3 (sc-269)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002812
187 MB
bam
2011-12-18
2012-09-18
lab=USC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5254; controlId=wgEncodeEH000762; md5sum=f547d5c526bf94abf9a15efccdc2fce9;
MCF-7
GATA3 (sc-269)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH002812
GSM935445
389 KB
narrowPeak
2011-12-18
2012-09-18
lab=USC; dataVersion=ENCODE Mar 2012 Freeze; subId=5254; controlId=wgEncodeEH000762; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsMcf7Gata3sc269UcdPk; md5sum=b9638f80eace067466fe530afe663f97;
MCF-7
GATA3 (sc-269)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH002812
GSM935445
738 MB
fastq
2011-12-18
2012-09-18
lab=USC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; subId=5254; controlId=wgEncodeEH000762; md5sum=d834e5f026c1d68631cc3a3bef42f420;
MCF-7
GATA3 (sc-269)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH002812
GSM935445
2.0 GB
fastq.tgz
2011-12-18
2012-09-18
lab=USC; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; subId=5254; controlId=wgEncodeEH000762; md5sum=32469356d1dbd31afa5e382b564e6312;
MCF-7
GATA3 (sc-269)
None
Signal
UCDavis Input Control
exp
wgEncodeEH002812
GSM935445
410 MB
bigWig
2011-12-18
2012-09-18
lab=USC; dataVersion=ENCODE Mar 2012 Freeze; subId=5254; controlId=wgEncodeEH000762; labVersion=PeakSeq1.0; tableName=wgEncodeSydhTfbsMcf7Gata3sc269UcdSig; md5sum=3dce0cc2d1fa756ec30b986d1978d605;
MCF-7
HA-E2F1 (MMS-101P)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000693
5.8 MB
bam.bai
2009-10-28
2010-07-28
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000762; labVersion=remapped from hg18, MCF-7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to the HA tag, PeakSeq 1.0 (fdr 0.001); md5sum=4aed5bd82f4cf4101786896d5835ded2;
MCF-7
HA-E2F1 (MMS-101P)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000693
1.1 GB
bam
2009-10-28
2010-07-28
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000762; labVersion=remapped from hg18, MCF-7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to the HA tag, PeakSeq 1.0 (fdr 0.001); md5sum=d916c5e89bf7810c0707256f7fe59564;
MCF-7
HA-E2F1 (MMS-101P)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000693
5.8 MB
bam.bai
2009-10-28
2010-07-28
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000762; labVersion=remapped from hg18, MCF-7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to the HA tag, PeakSeq 1.0 (fdr 0.001); md5sum=5686ad7d1c499b6601ced585c2d50bcb;
MCF-7
HA-E2F1 (MMS-101P)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH000693
1.2 GB
bam
2009-10-28
2010-07-28
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000762; labVersion=remapped from hg18, MCF-7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to the HA tag, PeakSeq 1.0 (fdr 0.001); md5sum=fca4c4735f6c5a5a2e407f0438d565ab;
MCF-7
HA-E2F1 (MMS-101P)
None
Peaks
UCDavis Input Control
exp
wgEncodeEH000693
GSM935477
311 KB
narrowPeak
2011-06-03
2012-03-03
lab=USC; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; subId=4165; controlId=wgEncodeEH000762; tableName=wgEncodeSydhTfbsMcf7Hae2f1UcdPk; md5sum=ba3e0ce4c8a99599edbbb1a87b7cb481;
MCF-7
HA-E2F1 (MMS-101P)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000693
GSM935477
929 MB
fastq
2009-10-28
2010-07-28
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=757; controlId=wgEncodeEH000762; labVersion=MCF-7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to the HA tag,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=179e5990f6feb75fdbf4020750ce5d5f;
MCF-7
HA-E2F1 (MMS-101P)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH000693
GSM935477
956 MB
fastq
2009-10-28
2010-07-28
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; subId=757; controlId=wgEncodeEH000762; labVersion=MCF-7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to the HA tag,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=69a5c254acb8803fd2146728b37c0b0e;
MCF-7
HA-E2F1 (MMS-101P)
None
Signal
UCDavis Input Control
exp
wgEncodeEH000693
GSM935477
371 MB
bigWig
2010-12-02
2011-04-08
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000762; tableName=wgEncodeSydhTfbsMcf7Hae2f1UcdSig; md5sum=e2f7b2fed35b033c60968fc39cdaad8e;
MCF-7
Input
None
Alignments
UCDavis Input Control
input
wgEncodeEH000762
5.9 MB
bam.bai
2010-01-15
2010-10-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000762; labVersion=remapped from hg18, MCF7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, crosslinks were reversed at 67*C overnight and Input was Qiagen purified, PeakSeq 1.0 (fdr 0.001); md5sum=d767f39e59bd9a022ac1f0c2c6cf3567;
MCF-7
Input
None
Alignments
UCDavis Input Control
input
wgEncodeEH000762
1006 MB
bam
2010-01-15
2010-10-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1364; controlId=wgEncodeEH000762; labVersion=remapped from hg18, MCF7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, crosslinks were reversed at 67*C overnight and Input was Qiagen purified, PeakSeq 1.0 (fdr 0.001); md5sum=b9c87ec1e94f7a626f64e241eaef0280;
MCF-7
Input
None
Alignments
UCDavis Input Control
input
wgEncodeEH000762
5.8 MB
bam.bai
2010-01-15
2010-10-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000762; labVersion=remapped from hg18, MCF7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, crosslinks were reversed at 67*C overnight and Input was Qiagen purified, PeakSeq 1.0 (fdr 0.001); md5sum=870fb5e651ca7dd29b48aa566f8a7a23;
MCF-7
Input
None
Alignments
UCDavis Input Control
input
wgEncodeEH000762
772 MB
bam
2010-01-15
2010-10-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dateResubmitted=2010-06-11; subId=1360; controlId=wgEncodeEH000762; labVersion=remapped from hg18, MCF7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, crosslinks were reversed at 67*C overnight and Input was Qiagen purified, PeakSeq 1.0 (fdr 0.001); md5sum=29a3a629a9f05b394398a42f88373d86;
MCF-7
Input
None
Raw data
UCDavis Input Control
input
wgEncodeEH000762
GSM935485
575 MB
fastq
2010-01-15
2010-10-15
lab=USC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1090; controlId=wgEncodeEH000762; labVersion=MCF7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, crosslinks were reversed at 67*C overnight and Input was Qiagen purified,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=6c8e3473748ba112edb5e9feb4f8ea12;
MCF-7
Input
None
Raw data
UCDavis Input Control
input
wgEncodeEH000762
GSM935485
776 MB
fastq
2010-01-15
2010-10-15
lab=USC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; subId=1090; controlId=wgEncodeEH000762; labVersion=MCF7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, crosslinks were reversed at 67*C overnight and Input was Qiagen purified,; softwareVersion=PeakSeq1.0 (fdr 0.001); md5sum=5b2dc415c27309b92ab4eeae951e07c4;
MCF-7
Input
None
Signal
UCDavis Input Control
input
wgEncodeEH000762
GSM935485
396 MB
bigWig
2010-12-02
2011-04-08
lab=USC; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; subId=3056; controlId=wgEncodeEH000762; tableName=wgEncodeSydhTfbsMcf7InputUcdSig; md5sum=28127f15e2564c9fbece2adfa80f4394;
MCF-7
TCF7L2 (2569)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002072
5.9 MB
bam.bai
2011-09-20
2012-06-19
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4836; controlId=wgEncodeEH000762; md5sum=662ca5b2a9a4e52bb98da86a7d24752e;
MCF-7
TCF7L2 (2569)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002072
551 MB
bam
2011-09-20
2012-06-19
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4836; controlId=wgEncodeEH000762; md5sum=2f286f4746ad0f0587df09e3d3a857bb;
MCF-7
TCF7L2 (2569)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002072
5.9 MB
bam.bai
2011-09-20
2012-06-19
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4836; controlId=wgEncodeEH000762; md5sum=b6b41b94fdbc5ed6a5f5332e68ef5750;
MCF-7
TCF7L2 (2569)
None
Alignments
UCDavis Input Control
exp
wgEncodeEH002072
490 MB
bam
2011-09-20
2012-06-19
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE Mar 2012 Freeze; subId=4836; controlId=wgEncodeEH000762; md5sum=c07c62deb7aa2557f64f712ce5726626;
lab=USC; replicate=1; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3251; controlId=wgEncodeEH000654; labVersion=Method of Chromatin Fragmentation: Sonication. Method of Immunoprecipitation: Protein G Magnetic Beads; md5sum=291c27e16885058b144d56308a627412;
NT2-D1
ZNF274 (H00010782-A01)
None
Raw data
UCDavis Input Control
exp
wgEncodeEH001775
GSM935584
2.0 GB
fastq
2011-01-13
2011-10-13
lab=USC; replicate=2; origAssembly=hg19; dataVersion=ENCODE Jan 2011 Freeze; subId=3251; controlId=wgEncodeEH000654; labVersion=Method of Chromatin Fragmentation: Sonication. Method of Immunoprecipitation: Protein G Magnetic Beads; md5sum=6f30b7d8a4bf00a5bafa32a781de5261;
This track shows probable binding sites of the specified transcription
factors (TFs) in the given cell types as determined by chromatin
immunoprecipitation followed by high throughput sequencing (ChIP-seq).
Included for each cell type is the input signal, which represents the control
condition where no antibody targeting was performed.
For each experiment (cell type vs. antibody) this track shows
a graph of enrichment for TF binding (Signal), along with
sites that have the greatest evidence of transcription factor binding (Peaks).
The sequence reads, quality scores, and alignment coordinates from
these experiments are available for download.
Display Conventions and Configuration
This track is a multi-view composite track that contains multiple data types
(views). For each view, there are multiple subtracks that
display individually on the browser. Instructions for configuring multi-view
tracks are here.
ENCODE tracks typically contain one or more of the following views:
Peaks
Regions of signal enrichment based on processed data
(normalized data from pooled replicates). ENCODE Peaks tables contain
fields for statistical significance,
including the minimum false discovery rate (FDR) threshold at which the test may be called significant
(qValue).
Signal
Density graph (wiggle) of signal enrichment based on
processed data.
Metadata for a particular subtrack can be found by clicking the down arrow in the list of subtracks.
Methods
Cells were grown according to the approved
ENCODE cell culture protocols.
Further preparations were similar to those previously published
(Euskirchen et al., 2007) with the exceptions that the cells
were unstimulated and sodium orthovanadate was omitted from the buffers.
For details on the chromatin immunoprecipitation protocol used, see
(Euskirchen et al., 2007) and (Rozowsky et al., 2009).
DNA recovered from the precipitated chromatin was sequenced on the Illumina (Solexa)
sequencing platform and mapped to the genome using the Eland alignment program.
ChIP-seq data was scored based on sequence reads (length ~30 bp) that align uniquely
to the human genome. From the mapped tags a signal map of ChIP DNA fragments
(average fragment length ~ 200 bp) was constructed where the signal height is the number of
overlapping fragments at each nucleotide position in the genome.
For each 1 Mb segment of each chromosome a peak height threshold was
determined by requiring a false discovery rate less than or equal to 0.05 when comparing the
number of peaks above threshold as compared the number obtained from multiple
simulations of a random null background with the same number of mapped
reads (also accounting for the fraction of mapable bases
for sequence tags in that 1 Mb segment). The number of mapped tags in a putative
binding region is compared to the normalized (normalized by correlating tag
counts
in genomic 10 kb windows) number of mapped tags in the same region from an input DNA control.
Using a binomial test, only regions that have a p-value less than or equal to 0.05 are considered to be
significantly enriched compared to the input DNA control.
Release Notes
This is Release 3 (August 2012). This release adds in 37 new experiments including 1 new cell line and 7 new antibodies.
Euskirchen G, Royce TE, Bertone P, Martone R, Rinn JL, Nelson FK, Sayward F, Luscombe NM, Miller P, Gerstein M et al.
CREB binds to multiple loci on human chromosome 22.
Mol Cell Biol. 2004 May;24(9):3804-14.
Data users may freely use ENCODE data, but may not, without prior
consent, submit publications that use an unpublished ENCODE dataset until
nine months following the release of the dataset. This date is listed in
the Restricted Until column on the track configuration page and
the download page. The full data release policy for ENCODE is available
here.